Candidatus Odyssella acanthamoebae: ID47_06140
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Entry
ID47_06140 CDS
T03232
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
paca
Candidatus Odyssella acanthamoebae
Pathway
paca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ID47_06140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paca03400
]
ID47_06140
Enzymes [BR:
paca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ID47_06140
DNA repair and recombination proteins [BR:
paca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ID47_06140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_dom3_C
ResIII
Cas3-like_C_2
RecG_wedge
AAA_30
Flavi_DEAD
tRNA_anti-codon
SecA_DEAD
nSTAND3
AAA_16
SLFN-g3_helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AIK96406
UniProt:
A0A077AVI0
LinkDB
All DBs
Position
1290636..1292735
Genome browser
AA seq
699 aa
AA seq
DB search
MEQDYLTRLSPLFAPLTTLPGVAGRRESLFKRLLGERAIDALLHFPSNINSYRLVQTIND
AAVGETIIIQAEVMSHRPATRRGGPHRVSCYDGHTFFEVVFFHGNIPYFHKILPEKTKRT
IIGRVDKNLSRWSITHPEKIYPATPDQIVPTKEVVYPLTTGVTNKCVHRAIDAALSRLIN
FPEWHDKTVAQELNLMGFSQAIRQLHHPQTMEDLQLTPAHERLIFDELFAHQLALHFSRL
VNQAETPGQSMIGTGKLVRQLLAQLPYEPTESQKDVLRDIFEDMAKPNPMTRLIQGDVGS
GKTLVALISMVRAIESGFQTAILAPTDILARQHAETIINLADTIGIKAVVLTGREKGKKR
AQILDNLAQGKIDLLIGTHALLVEDVQFKNLGLAVIDEQHRFGVEQRLALAQKGNNPDIL
AMTATPIPRSLQLANFGDMDVSIIREKPAGRQPVTTKVLPLNRLNDVIDGVQRALQDQAK
VFWVCPLVEESEKINVSAAVDRYQQLQEIFGHRIGLVHGKMKAADKDAVMEQFVNGDVDI
LIATTVIEVGVNVPAATIMIIEHAERFGLAQLHQLRGRIGRGERAATCVLLYGHEMSQVG
KERLATMRQTNDGFEIAEADLRLRGGGDILGTRQSGLPGFRLADFVSYPDKMSSLLALAN
TEAKKVLKTDSALRGDRGFAIRLLLEVFAMDNAIKYTRS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagactatctaacacgattgtcccctctttttgcccctttaacgaccttgcct
ggggtggcaggtcgccgcgaatctttatttaaaagattattgggagagcgtgccattgat
gctcttcttcattttccaagtaacataaattcctacaggcttgttcaaactattaacgac
gccgccgtcggcgagactattattatccaagccgaggtgatgagccatcgcccagcaacc
cgtcgcggtggcccccatcgggttagttgctatgatggtcatacgttctttgaagtggtg
ttttttcatggcaacatcccctattttcataagattttacccgaaaaaactaaacgaaca
attataggtcgagtggataaaaatcttagccgctggagcattacccatcctgaaaagatc
tatcccgcaacaccggatcaaatcgtgccaacaaaagaagtcgtctaccctttaacaacg
ggcgtaacaaacaaatgtgttcaccgtgccatcgatgcagccttaagccgcctgatcaat
tttccagaatggcatgataaaacagtcgctcaagagttaaaccttatgggttttagtcaa
gctattcgacaattgcatcacccccaaacaatggaagacttacagctaacaccagcccat
gaacgtcttattttcgatgaactattcgcccatcagttagcgttacacttttctcgtctg
gttaatcaagcagaaacccctggtcaatcgatgatcggcacaggaaaacttgtccgtcaa
ttattagctcaattgccttatgagccgactgaatcgcaaaaagatgtattgagagatata
tttgaagatatggcaaagccaaatccgatgacacggttaattcaaggggatgtgggcagt
ggtaagacattggttgccttaatcagcatggtgcgggctattgaatcaggttttcaaact
gcaatattagcaccaaccgatatcttggcgcgtcaacatgcagaaacgatcataaactta
gctgatacaattggaattaaagcagtcgttctaacaggccgtgagaaaggcaaaaaaaga
gcacaaattctggataacctcgctcaggggaagattgatctactcattggaacccacgca
ttgcttgttgaggatgttcaatttaagaatttaggattagccgttattgatgaacagcat
cgatttggtgtggaacagcgtttagccttagctcagaaaggaaataaccctgacattttg
gccatgacagcaacccctattccgcgctctttacaactagcaaattttggtgacatggat
gtatccattatccgggagaaacccgctggaaggcagcctgtaacgacaaaagttctaccc
ttaaatcgtcttaatgacgtaattgatggcgtacagcgcgctttacaagatcaagcaaaa
gtcttttgggtttgccccttggtcgaagaatcagaaaaaatcaatgtatccgctgctgtc
gatcggtatcagcaacttcaggagatttttggtcatcgcataggcttagtccatgggaaa
atgaaagctgctgacaaagatgctgtgatggagcaatttgtgaatggcgatgtcgatatc
ttaatagccacaacagtcatagaggttggtgttaacgtaccggccgcaaccattatgatt
attgagcatgcagaaagattcggtctggcccagctgcaccagttacgtggacgaattgga
cggggagaaagagcagcaacctgtgtgctgctctacggccatgaaatgagccaagtggga
aaagaacgcttagcgacaatgcgccaaaccaatgatggatttgaaattgcggaagccgac
ttgcgcctgaggggtggcggggatattttggggacgcgtcaaagtggtttgccgggcttt
cgtttagcagattttgtctcatatcccgataaaatgagttcattattagcgttagccaac
acagaagccaaaaaggttttaaaaacagactctgctttacgcggcgaccggggctttgcc
attcgccttctacttgaggtctttgccatggataatgccataaaatacacacgttcgtaa
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