Candidatus Odyssella acanthamoebae: ID47_08450
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Entry
ID47_08450 CDS
T03232
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paca
Candidatus Odyssella acanthamoebae
Pathway
paca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ID47_08450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paca03021
]
ID47_08450
03400 DNA repair and recombination proteins [BR:
paca03400
]
ID47_08450
Enzymes [BR:
paca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ID47_08450
Transcription machinery [BR:
paca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ID47_08450
DNA repair and recombination proteins [BR:
paca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ID47_08450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
AIK96743
UniProt:
A0A077AYP2
LinkDB
All DBs
Position
complement(1763978..1764997)
Genome browser
AA seq
339 aa
AA seq
DB search
MLQNNWEALIKPNKLDVKYSSPDLRHADVVVEPLERGYGLTLGNALRRILLSSLQGAAFT
SVKIEGVLHEFSTIPGVMEDVTDIILNLKTIGVRSTVEGVKKVKLVASSKGPVYARQIEC
PTGIEILDQDIIICHLDEGAKLSMEMTVESGKGYIPANSISHDDKPIGLIPIDAIFSPVK
RVSYKIEPTRVGQRTDFDKLILNISTDGSLKPDDAIALAARIMQDQLHSFINFDEPKAAD
KKESKIELPFNPNLLRKVDELELSVRSANCLKNENIIYIGDLVQKSEHEMLRTPNFGRKS
LNEIREVLETMGLTLGMIIPNWPPENIEELTKKLEDPFN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcaaaacaattgggaagcgttaattaagccgaataagttagatgtaaaatacagc
agtcctgatttacgtcatgctgatgtcgttgttgagcctcttgaaagagggtacggccta
actttaggaaacgcattgcgtcgcattcttttgtcatcgctacaaggggctgcgttcaca
tctgttaagattgagggtgttcttcacgagttctctacaattcctggcgtgatggaagat
gtaacagatattattcttaaccttaagacgattggtgttcgtagcacagttgagggcgtt
aagaaagttaagcttgttgccagcagtaaagggcctgtttatgcgcgtcagatcgagtgt
cctacgggaattgaaattcttgatcaagacattattatctgccatttagacgaaggtgca
aagctttcaatggaaatgactgttgaatctggtaaaggttatattccagcaaacagcatt
tctcatgatgataagccaattggattaattccaattgatgcaatctttagtccagtaaag
cgggtaagctataaaattgaacctacacgtgtagggcaaagaactgactttgataagctc
atcttgaacatcagcacagatggatccttgaagccagatgatgctatcgctttagcggct
agaattatgcaagatcaactgcatagctttatcaattttgatgagcctaaggcagctgat
aaaaaagaaagtaaaattgaattaccattcaatccaaatcttttgagaaaagtagatgag
ttagaattgtcagtacggtcagcaaactgcctcaagaatgaaaatatcatctatattggt
gatcttgttcaaaagtcagagcatgaaatgttgcggacacctaactttgggcgtaagtct
ttgaatgaaatacgtgaagttcttgaaactatgggattaacattaggaatgattattcct
aattggccaccagaaaatatcgaagagctaacaaagaaattagaagatccttttaattaa
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