Candidatus Odyssella acanthamoebae: ID47_09875
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Entry
ID47_09875 CDS
T03232
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
paca
Candidatus Odyssella acanthamoebae
Pathway
paca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ID47_09875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paca03400
]
ID47_09875
Enzymes [BR:
paca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ID47_09875
DNA repair and recombination proteins [BR:
paca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ID47_09875
RecFOR pathway proteins
ID47_09875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_3
AAA_14
Rad17
RNA_helicase
AAA_22
nSTAND3
AAA_2
AAA_17
NB-ARC
TsaE
AAA_18
AAA_24
Sigma54_activat
DUF815
NACHT
NTPase_1
Bac_DnaA
ABC_tran
AAA_28
IstB_IS21
Parvo_NS1
NPHP3_N
Cytidylate_kin
Sigma54_activ_2
AAA_25
bpMoxR
AAA_33
AAA_19
AAA_PrkA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIK96969
UniProt:
A0A077AYA7
LinkDB
All DBs
Position
complement(2028685..2029671)
Genome browser
AA seq
328 aa
AA seq
DB search
MEERIIAPDEMGEDSLNHSLRPEKLTDFTGQEDVRQNLKIFIDAAKSRNEALDHVLLYGP
PGLGKTTLAQIIAKEMGVNFRSTSGPIIARAGDLAAILTNLQPHDVLFIDEIHRLNPAVE
EVLYPAMEDFKLDLMIGEGPSARSIQIDLPPFTLIGATTRSGLLTQPLRERFGIPLRLQF
YTVDELKKIIMRSALLLGCEIAEKAAGEIAARSRGTPRIAGRLIRRVRDFAAVSEDKEIL
LELTRTALNRLGVDPLGLDAQDRRYLQYLADYYKGGPAGVETLAAALSEQKDTLEEVIEP
YLIQCGLVQRTSRGRVLTELAYEHLNLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggataattgctccggatgaaatgggggaagattcactcaatcactcctta
cgccctgaaaagctaactgattttactgggcaagaggatgtccggcaaaatctaaaaatt
tttattgatgctgccaaatctcgtaatgaagctcttgatcatgttctactgtatggcccg
cctggattgggtaaaacaacgttggctcagattattgcgaaagaaatgggtgtcaatttt
cgttcaacgtcgggtccaattattgcacgagctggggatttggccgccattctaacaaat
cttcagccccatgatgttttatttatcgatgaaattcatcgtctcaatcccgctgtcgaa
gaggttctttatccggcgatggaagattttaaacttgatttaatgattggggaaggcccg
tctgcgcggtcgatccagattgatttaccacccttcacccttattggtgcaacaacacga
tcgggactgttgacgcagccattgcgagaaagatttggaattcctctgcggttacaattt
tatacggttgatgaactaaagaaaattattatgcggagtgctttattgcttggctgtgag
attgctgaaaaagcagctggtgagattgcggccagatctcgcggaactcctcgtattgct
ggccgattgattcggcgggtgcgcgattttgcggcagtgtcagaagacaaggaaatcctt
ttagaactcacacgcaccgctttaaatcggttaggggtggacccgttagggttggatgct
caagaccgtcgttatttgcaatatctagccgattattacaaaggcgggccagcgggtgtt
gaaacattggcggcagccctttcggagcaaaaagatacattggaagaggttatcgaaccc
tatttgattcagtgtggtttagtacaacggacgtcgcgcggccgagttttaactgaatta
gcctatgaacatctaaatttactgtaa
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