KEGG   Candidatus Odyssella acanthamoebae: ID47_10410
Entry
ID47_10410        CDS       T03232                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
paca  Candidatus Odyssella acanthamoebae
Pathway
paca03030  DNA replication
paca03430  Mismatch repair
paca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ID47_10410
   03430 Mismatch repair
    ID47_10410
   03440 Homologous recombination
    ID47_10410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paca03032]
    ID47_10410
   03400 DNA repair and recombination proteins [BR:paca03400]
    ID47_10410
Enzymes [BR:paca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ID47_10410
DNA replication proteins [BR:paca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ID47_10410
DNA repair and recombination proteins [BR:paca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ID47_10410
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIK97054
UniProt: A0A077AYI9
LinkDB
Position
complement(2125757..2126446)
AA seq 229 aa
MREIVLDTETTGFNPKTGDRIIEIGCIELHNLLPTGKTYHTYVNPQRDVPPGASKVSGIT
TEFLYDKPLFVQVVDPFLEFIGDSPLIIHNASFDMGFINAELERLCRNPLSVMRAIDTVQ
MARQKFPGSPASLDALCRRFGIDLSARVTHGALLDAGLLASVYLELKGGRQVAFAFQAES
QSSHGTLVQEISQYKGREFRPSRSFSLSEEECQLHQEFISGIKNALWTR
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagagagattgttttagatacggaaaccaccggttttaatcccaagacgggcgataga
attatcgaaatcggatgtattgagttgcacaatctcttaccgacaggcaaaacctatcat
acctatgtcaatccccaacgagatgtaccgcccggtgcgtcaaaggtcagcggcattacc
acagagtttttatatgacaaaccgttgtttgttcaagtggttgatccctttttagagttt
attggggattccccactcattattcacaatgcaagttttgacatggggttcattaatgcg
gagttagaacgcttgtgtcgtaatcctttatccgtaatgcgagccattgataccgtgcaa
atggcgcggcaaaaatttcctggctctccggcctccttggatgccctttgtcgtcgtttt
ggaattgatttatccgcgcgtgtaactcatggagccttattggacgccggcttacttgcg
tcagtttacctcgaactgaaaggagggcgccaagttgcctttgcttttcaagcagaaagc
caaagtagtcatggcacgttggttcaggaaattagccagtataaaggcagagaattccgt
ccttctcggtctttttccctgtccgaagaagagtgccaactccatcaagaatttatctcg
ggcataaaaaacgctctttggacacgttaa

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