Candidatus Odyssella acanthamoebae: ID47_11410
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Entry
ID47_11410 CDS
T03232
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
paca
Candidatus Odyssella acanthamoebae
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paca03021
]
ID47_11410
03009 Ribosome biogenesis [BR:
paca03009
]
ID47_11410
Transcription machinery [BR:
paca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ID47_11410
Ribosome biogenesis [BR:
paca03009
]
Prokaryotic type
rRNA transcription factors
ID47_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
HHH_2
DUF4332
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AIK97208
UniProt:
A0A077AZR0
LinkDB
All DBs
Position
2332646..2334151
Genome browser
AA seq
501 aa
AA seq
DB search
MSQPRHEILAVADAVAREKGIERDEVLYAMEQAIQKAARAKYGFEKDVRAKVDTSTGDVT
IWKVLTVVEEVENPLTQISLAQAQLHDKNHKLGDEIIEPLPPIEFGRVAAQSARQVIIQK
VRDAERAHQYAEFKDRAEQIIGGIVKRVEFGNVVVDLGRSEGILRREDLIQREVFRNGDR
IRAYVSEVRPDARGPMVALSRTHLQFMAKLFESEVPEIYDGVIEIKAVARDAGSRAKIAV
YTTDASIDPVGSCVGLRGVRVQAVVTELQGEKIDIVPWSANPATFVVNALAPAEVIKVVL
DEEAHRVDVVVAEDQLSLAIGRRGQNVRLASQLTGWNIDIMTEEQEAKLRTEEYNSRTQL
FMNALDVDEVIAQLLAADGFTTVEELSFAPLEELMSIEGFDEAIAQEIQSRALSFVEQRA
KASLEKAKDLGVSEDILEIDGMTAEMLLKLAEYKIKTLDDFADLSGDEFIEIVQDEQLTI
EQANAMIMAARAHWFDEKPKA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
attagccagccacgtcatgagattttagctgtggcggatgctgttgcgcgtgaaaaagga
attgagcgggacgaagttctctatgccatggagcaggcaatccaaaaagccgctcgtgct
aaatatggttttgaaaaagatgtgcgtgctaaggtagatacctcgaccggagatgtaact
atttggaaagttctgacagttgttgaggaagttgaaaatcctttgactcaaatttctttg
gctcaagcacagttgcatgataaaaaccacaagctgggtgacgagattattgaaccttta
ccacccattgagtttggccgggtagctgcgcaaagtgcgcgtcaggtcattattcaaaaa
gttcgggatgcagaacgcgcgcatcagtatgcagaatttaaggatcgtgcagaacaaatt
attggtggtattgttaagcgcgttgaatttgggaacgtggttgtcgatttaggacgatct
gagggtattttgcgccgggaagatttaattcaacgggaagttttccgtaacggtgatcgg
attcgagcttatgtttcagaagtccgtcctgatgcccgtgggccaatggttgctttatcg
cggacccatctccaattcatggctaaactgtttgagtcagaagttcctgaaatttatgat
ggggtaattgaaattaaggctgtcgctcgtgatgccggtagccgtgctaagattgctgtt
tacaccacagatgcttctattgatcctgtcgggtcctgtgtgggcttacggggtgtgcgg
gttcaggcggttgtaaccgaactgcaaggtgagaaaattgacattgtgccctggtctgca
aatcctgcaacctttgtggtgaatgccttggctcctgctgaagttatcaaggttgttttg
gacgaagaagctcaccgtgttgatgtggttgtggctgaagatcaactgagtcttgctatt
ggtcgtcgtggtcaaaatgtccgtttagccagccaactgaccggctggaacatcgatatt
atgaccgaagagcaagaagcaaagttgagaacggaagaatacaacagtcgtactcaattg
tttatgaatgcattggatgtggacgaagttattgcacagcttttagcggctgatggattc
acaacagttgaagaattgtcatttgcaccgttagaagaattaatgtcaatcgaggggttt
gatgaagcgattgcccaagaaattcaatcccgcgctcttagctttgttgaacaacgggct
aaggcatctttggaaaaagccaaggatttgggggtcagtgaagatatccttgagattgac
ggcatgacagcagaaatgttattgaaattagcagaatataaaattaaaacattggatgat
tttgctgatctttcaggcgatgaatttattgaaatcgttcaggatgagcaactcacgata
gaacaggcaaatgccatgattatggcagctcgtgcccattggtttgacgaaaaaccaaaa
gcataa
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