Pectobacterium actinidiae: M9782_00075
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Entry
M9782_00075 CDS
T08879
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00300
Lysine biosynthesis
pacb00470
D-Amino acid metabolism
pacb01100
Metabolic pathways
pacb01110
Biosynthesis of secondary metabolites
pacb01120
Microbial metabolism in diverse environments
pacb01230
Biosynthesis of amino acids
Module
pacb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M9782_00075
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M9782_00075
Enzymes [BR:
pacb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M9782_00075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WEF11743
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All DBs
Position
complement(17693..19096)
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AA seq
467 aa
AA seq
DB search
MSNLFSFAAVSSLPVAQAHWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIAALRTVLQRYDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSLQELKDALRAG
SDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDEVLALADLLRVAEPVRVLLRYRP
SFAQNSRFGMLADEVALCLEALSTRQDAFHLEGFHFHLGGYEPETRVAALAEVLPLLDRA
RSKGLQPAIIDIGGGLPIQYLSASRYQDYVAKQNGADYRHGQVPTSFYPYGGERSAADYL
DVFLSASIGQNRVADVLKQYGLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGKAWIAGHSCLDDDVITNRLIHFRTVPQ
PGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttccctccctgttgctcaggcccactgg
cctgagagactgacaccttatttagatagtgagattgagcagtttcttttcaactcgccg
caaaggctgtcatggttggttgagcagtatgggtcgccgctgaatattgtttggccgcac
accgtggccaacaatattgcggcattgcgaacggtgttgcagcgttacgatgtggactgc
cgcctgtactacggcgcgaaggtgaataaatcaccggggctggtacaggcggcggttaac
gccggcgttggggtggatgtttccagtttacaggaactgaaagatgcgctgcgcgcaggc
agtgacggcgcgcggttgtgcgccactggaccggccaaaacgcgcgagttcctgacggaa
ctggttcatcaccgcgcgcttatcgtgctggattcgccggaagagttcgatgaggtgctc
gcgctggcggatttactgcgcgtggcggagccggtgcgggttctgctgcgctatcgcccg
tcgttcgcacaaaacagccggtttggcatgctggccgatgaggtcgcgctctgtctggag
gcgttgagtacccgacaggatgcgtttcatctggaaggtttccatttccatctgggcggc
tatgagcccgagactcgcgtagccgcactggctgaggtgttgccattactggatcgtgcg
cggtcaaagggattgcagcccgctattattgatatcggcggtggcttgccgattcaatat
ctttcggcttcacgctatcaggattatgtcgcgaagcagaatggagcggactatcgccac
ggtcaggtgccgacctcgttttatccgtacggaggtgagcgctcggctgccgactatctt
gacgtcttcctgtctgcgtcaatcgggcaaaaccgtgtcgcggacgtactaaagcaatac
ggcctgattctggcgattgagccgggacgcagtctggccgatcaaagtgcgattactgtg
tttcgcgttacgcgcacgcgccgccagccagatggcaaccacgtcgtgtttgtcgaaggc
agcagcttcagcgcgtgtgaaacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacgcgtccgacgccgggtaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcgaaccgtgccgcag
cctggcgatttactgatttacgcgaatacggcgggataccagatggacctgctggaaaac
gcgtttcatcggcatccgctgcctgcgcgcctgtgtgcgttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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