Pectobacterium actinidiae: M9782_00525
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Entry
M9782_00525 CDS
T08879
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9782_00525 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacb03019
]
M9782_00525 (recQ)
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_00525 (recQ)
Enzymes [BR:
pacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9782_00525 (recQ)
Messenger RNA biogenesis [BR:
pacb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M9782_00525 (recQ)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M9782_00525 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Helicase_Sgs1
zf-CCCH_8
Motif
Other DBs
NCBI-ProteinID:
WEF11833
LinkDB
All DBs
Position
complement(126739..128568)
Genome browser
AA seq
609 aa
AA seq
DB search
MSTAEVLNKEALAVQVLRDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGHIKLLY
IAPERLTTDSFLDHLAHWQIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIAL
TATADETTRNDIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQGQRGKSGI
IYCNSRSRVEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQSCGNCDICLDPPKRYDGLVEAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIRDFGHDKLPVYGIGKEKSQEHWVSVLRQLIHLG
LLNQNITMHSAVQLTESARPILRGEMPLQLAVPRVINLKPRANQKSYGGNYDRKLFAKLR
KLRKSIADEDNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMNMIR
DHVDNNDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggaagtattgaataaggaagcgctggcggttcaggttctacgggacacg
ttcggctaccagcaattccgaccgggtcagcaggaaattatcagcgcgacgctcagtggg
caagactgtctggttatcatgccgacaggcggcggcaaatcgctgtgctatcaaattcct
gcgctggtgatggacgggctgacgctggtggtgtccccgttgatttcactgatgaaagat
caggttgatcagcttcaggcctatggtgtctccgccgcttgtcttaattcgacgcagacg
cgcgagcaacagcttgaggtgatggcaggttgtcgtactggtcatatcaagctgctttat
attgcgccggaacgtctgacgacggacagcttcctcgatcatcttgcccattggcagatt
gccctgatcgcggtggatgaagcgcactgcatttcccaatgggggcacgatttccgccct
gaataccgggcgctggggcagattaaacagcgtttcccccatcttccttttattgcgctg
accgctaccgccgacgagaccacgcggaacgatatcgttcgcctgctggatctccagtca
ccgctgattcagatcagcagctttgaccgtccgaatattcgctacacgctggtggagaag
ttcaagccgctcgatcaactctggatgtttgtgcaggggcagcgtggaaaaagtggcatc
atctactgtaatagccgctcccgcgtggaagatatttgcgcacgcttgcaggcgcgtggg
ctgagcgcaggcgcttatcacgccgggctggataacgaacggcgtgcgcaggtacaggaa
gcgttcctgcgcgacgatcttcaagtggtggtagcgactgtcgcctttggtatgggcatc
aacaagcctaacgtgcggtttgtggtgcattttgatatcccgcgcaacatcgagtcctac
tatcaggaaacggggcgtgccgggcgtgacggcctcgctgctgaagccgcgctgttctac
gatccggcagatatggcgtggctacgccgctgtctggaagagaaaccggctgggccgcag
ttggatattgagcgccataagctcaatgcgatgggggcgtttgccgaagcgcagacttgc
cgtcgtctggtgctgctgaattatttcggtgaaggtcggcaacagtcgtgcggcaactgc
gatatttgtctcgatccgccgaagcgctacgatgggctagtcgaagcacaaaaggcgctc
tcctgcgtctatcgggttgggcagcgctttgggctgggatatatcgtcgaggtgctgcgc
ggggcgaataaccagcgtatccgtgacttcggccatgacaaactgccggtttacggtatt
ggtaaagagaaatcgcaggagcattgggtcagcgtgctgcgccaactgattcatctgggt
ttgctgaaccagaacatcacaatgcattccgctgtacagcttaccgaatctgcgcgtccg
atactgcggggtgaaatgccgctacagctggctgtgccgcgtgtgattaacctgaaaccc
cgcgccaatcaaaaatcgtacggtggaaattacgaccgcaagctgtttgccaaattgcgc
aaactgcgtaaatccatcgcggatgaagacaatattccaccttacgtggtgttcagcgat
gccacgctgctggagatggccgaactgatgccgatcaccgcgggtgaactgttaaatatc
aacggggttggacaccgtaaactcgaacgtttcggtgcgcctttcatgaacatgattcgc
gatcatgtcgataataacgatgacgagtga
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