Pectobacterium actinidiae: M9782_01530
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Entry
M9782_01530 CDS
T08879
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacb03021
]
M9782_01530 (rpoH)
Transcription machinery [BR:
pacb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9782_01530 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WEF12016
LinkDB
All DBs
Position
complement(338876..339733)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLDAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKSKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADKYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccaatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggatgcggctaagcacctgattctgtcacacctgcgtttt
gttattcacgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaatatcggcctgatgaaggcggtacgtcgctttaaccctgaagttggcgtgcgt
ctggtttcttttgctgtgcattggatcaaagccgaaattcatgagtacgtgctgcgtaac
tggcgtattgtgaaagtcgcgaccaccaaagcacagcgtaagttgttctttaacctgcgt
aagtcgaaaacgcgcctcggttggtttaatcaggacgaggtcgaactggtggcgcgtgaa
ctgggcgtgaccagcaaagacgtgcgcgagatggaatcccgcatggcggcgcaggacatg
acgttcgatccgacgccggaagaagattctcacgacggcaaggcgatgtcgccgatgctt
tacctacaggataaatcgtctgattttgccgatggcattgaagaagataactgggaaacg
catgcggccgataagctcacctacgcgttggaagggttggatgaacgtagccagcatatc
attcgcgcgcgctggctggatgatgacaacaaatccaccttgcaggagctggccgataag
tacggcgtttctgcagaacgcgtgcgtcagttagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcctaa
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