Pectobacterium actinidiae: M9782_02375
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Entry
M9782_02375 CDS
T08879
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03030
DNA replication
pacb03410
Base excision repair
pacb03420
Nucleotide excision repair
pacb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9782_02375 (polA)
03410 Base excision repair
M9782_02375 (polA)
03420 Nucleotide excision repair
M9782_02375 (polA)
03440 Homologous recombination
M9782_02375 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacb03032
]
M9782_02375 (polA)
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_02375 (polA)
Enzymes [BR:
pacb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9782_02375 (polA)
DNA replication proteins [BR:
pacb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M9782_02375 (polA)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M9782_02375 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9782_02375 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WEF12173
LinkDB
All DBs
Position
534297..537086
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYHPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHKMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKSVLISTGDKDMAQLVTPNVTLINTMNNSILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
EVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDVESGIWMQGK
KSSQPVQAVSNAVVEQVAEEDNAPTLSADGYVTILDEKTLLDWVERLKQAEVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRTKVLALFKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTARLAELETQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLEELALNYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIASKGYSIVAADYSQIELRIMAHLSG
DKGLLNAFANGLDIHRATASEVFGTALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDAPKVKMIMQVHDELVFEIHDSVIEESISK
IKALMEGCMQLNVPLQVDIGTGMNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaaccctttaatactggtagacggttcatcctatttgtaccgc
gcttatcacgctttcccaccgttaacaaacagcgcgggagaagcaaccggtgcaatgtat
ggcgtactgaatatgctacgcagtttgctgctgcaatatcatcccagccatgtcgccgtc
gtttttgatgcgaaagggaaaacgtttcgcgacgaactgttcgagaactataaggctcac
cgtccacctatgccggaggatctacgcgaacagatagagccgctgcataagatggtgaaa
gcgatgggattgccgcttctggccgtttccggcgtagaggcggacgatgtgattggcacg
ctcgcggtgcaggcggaaaaagcgggtaagtcggtgctgattagtaccggcgataaagat
atggcacagctggtgacgccgaatgtgacactcattaataccatgaataactcgattctt
ggcccacaggaagtgtgtgataagtacggtatccctcctgagctgattatcgatttcctc
gcgctgatgggggatgcatcggataacattcccggtgtacctggtgtgggtgaaaaaacg
gctcaggcgctattgcaagggctcggtgggttggactcgctatatgctaatcttgataaa
attgccggtctttccttccgtggtgcgaaaaccatggcgccgaagctggagcagcacaaa
gaagtggcctacctctcttatcagctagccaccattaaaacggatgtcgaactggagctt
agctgcgatcagctcaccgttaatgagctggatgtggatgaactgcatcgtctcttttcc
cgttatgaatttaaacgctggttatcagatgttgaatcaggcatctggatgcagggtaaa
aagagcagccagcctgttcaggctgttagtaacgcggtggttgagcaagttgctgaagaa
gataacgcgcctacgctttctgctgacggttatgtcacgattcttgatgagaaaacgctg
ctcgattgggttgagcgtttaaaacaggctgaagttttcgcttttgatacagaaaccgat
ggattggatacgcttaccgctaatctgattggcctgtcatttgcgattaaaccgggtgaa
gcggcttatctgccgttggcgcatgactatctggatgcgcccgaacagttggatcgcacc
aaggtgttggccttgttcaaaccgctgctggaagatgagaagctgcttaagattggccag
aatctcaaatttgataaaggcgtcatgcagcgttacgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttacgtgctcgacagcgtagcgggccgtcatgatatggat
agtctggccgaacgctatctgaatcacaaaaccattacctttgaagagatcgcaggtaaa
ggcaaaaatcagctgacgtttaatcagatcgcattagaacaggccgggccttatgcggct
gaggatgcggatgttacgctgcatctgcaccagaagctctgggggaagctccagccgcat
gccgatctgtgccaggtcttccagactatcgatatgccgctggtgccggttttatcccgc
attgagcgtacgggcgtgctgatcgatcccgctattctggcagaacactcaaaagagcta
acagcacgtctggctgagctagaaacacaagcgtatgagctggcgggtgaagagttcaac
ctctcatccaccaagcagttacaaggcattctgtatgaaaagcagaagttgccaattctg
aagaaaacgccgaaaggtgcgccgtcaaccaatgaagaagtactggaagagttggcactg
aactaccctttgccgaagctaatcctggaataccgtgggttggccaaattgaaatcgact
tacaccgataagctaccgttgatgatcaatccagcgacgaagcgggtgcatacgtcttat
catcaggctgtaactgcgaccgggcgtttgtcttccagcgatccgaacctgcaaaatatc
ccagtgcgtaatgacgaaggacgccgtattcgtcaggcattcattgcgtctaagggctat
agcattgttgcggctgactactcgcagatcgaactacgcattatggcgcacttatcgggt
gataaagggctgttgaatgcgttcgcgaacgggctggatatccaccgggcaacggcatca
gaagtgtttggtaccgcgctggataaggtgacatcagaacagcgtcgcagtgcgaaagcg
atcaactttggtttgatctacggcatgagcgcgtttggcttgtcacgtcagttgaatatt
ccccgtagcgaatcgcagaaatacatgaacctgtattttgagcgttatcccggagtgcag
gattacatggagcgaacgcgtcaacaggccgcagaacatggctatgtctccacattggat
ggtcgtcgtctctatctgcctgacatccattctcgtaatgcgatggcgcgtaaaggtgcg
gaacgtgcggcgattaatgccccaatgcagggcaccgctgctgatattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacgcgccgaaggtgaagatgatcatgcag
gttcacgatgaattggttttcgagattcatgattcggttattgaagaatccattagtaaa
atcaaagcattaatggaaggttgtatgcaattgaatgttccattacaggtagatatcggc
acaggtatgaactgggatgaagcacattaa
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