Pectobacterium actinidiae: M9782_02545
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Entry
M9782_02545 CDS
T08879
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M9782_02545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacb03021
]
M9782_02545
Transcription machinery [BR:
pacb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9782_02545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
Sigma70_ECF
PhyR_sigma-like
Rv2175c_wHTH
Fe_dep_repress
HTH_29
HTH_24
HTH_31
HTH_10
HTH_Mga
HTH_IclR
HTH_7
PAX
Motif
Other DBs
NCBI-ProteinID:
WEF12205
LinkDB
All DBs
Position
580432..580944
Genome browser
AA seq
170 aa
AA seq
DB search
MVRKATASVNDFAQQLYFDHHRWLCTWLRHKLDCSQHAEDLAQDTFLSVLMNPELLTIRQ
PRPFLATVARRLVANHYRRKKIEDAYLDVLSTQPDACMPSPETRLLTLEILEQLDAALDG
LPAPVREAFLLAHLHGMRYSDIAERLRVSSSSVKQYLQRANLQCFFALPL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaagcgacggccagcgttaatgactttgcccagcagctctatttcgatcac
caccgctggttgtgtacctggctgcgccataaactggactgctcccaacatgcggaagac
ctggcacaggacacgttccttagcgtgctgatgaacccggaactgctcacgattcgccag
ccgcgcccgtttttggctaccgtggcacgccgtttggtcgccaatcattatcgtcgtaaa
aagattgaagatgcctatctggacgtgctgagcacgcagccggatgcctgtatgccatcc
ccggaaacgcgtctgcttaccctcgaaattcttgaacagcttgatgctgcattggatggc
ctgccagcaccagtcagagaagcgtttctgctggcgcacctccacggtatgcgctacagc
gatattgccgaacgcttgcgggtttccagcagttcagtgaaacagtatctgcaacgcgcc
aatctccagtgtttctttgcgctgccgctatga
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integrated database retrieval system
