Pectobacterium actinidiae: M9782_03020
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Entry
M9782_03020 CDS
T08879
Symbol
rfaC
Name
(GenBank) lipopolysaccharide heptosyltransferase RfaC
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00540
Lipopolysaccharide biosynthesis
pacb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M9782_03020 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pacb01005
]
M9782_03020 (rfaC)
Enzymes [BR:
pacb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
M9782_03020 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
pacb01005
]
Core region
M9782_03020 (rfaC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
WEF12291
LinkDB
All DBs
Position
complement(679025..680008)
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AA seq
327 aa
AA seq
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MRVLIVKTSSMGDVLHTLPALTDAMQAIPGIQFDWVVEEGFAQVPSWHPAVSRVIPVAIR
RWRKSWFSAPIRQEREEFKRQLRQHRYDAVIDAQGLIKSALLVTRLANGKKHGLDCKSAR
EPLASWFYNYRHPISRRQHAVERVRELFAASLSYKKPTERGDYAIASRFLSQSPADANRY
LVFLHATTRDEKHWPEAHWRELIALLAPSGLHIKLPWGAEHEHQRALRLAEGFPHVEVLP
RLTLQQVAEVLAGAKAVVSVDTGLSHLTAALDRPNITLYGPTDPGLIGGYGMNQVVEMSE
SQKMETIPASLVHQKLEKLIELPASGE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgctgatcgtgaaaacgtcgtcaatgggcgatgtgctgcacaccttaccagcc
ttaacggacgcgatgcaggctattcccggtatccagtttgattgggtggttgaagaaggc
ttcgcgcaagttccaagctggcacccggcggtttcccgcgtcattccagtcgcgatacgc
cgctggcgaaaaagctggttcagtgccccgatacgtcaggaacgtgaagaatttaaacgc
cagctacgccagcaccgctatgatgcggttattgatgctcaagggctgattaaaagcgcg
ctgctggttacgcgtctagccaacgggaagaagcacggattggattgcaaaagcgcccgc
gagccgctggcaagttggttttataactatcgccaccccataagccgccgacaacatgcc
gtggagcgcgtgcgggagctgtttgccgccagcctgagctataagaagccgactgaacgc
ggcgactatgcgattgcctcacgtttcctctcccagtcgcccgcagacgctaaccgctat
ctggtgttcctccatgccacgacgcgtgatgaaaaacactggccggaagcgcactggcgt
gagctgattgccctattagcaccgagtggactacacatcaaactcccctggggagcggag
catgagcaccagcgcgcattacggctggcggaaggctttccgcacgttgaagtcttacca
cgcctcacgctgcaacaggtcgccgaggtattagctggtgccaaagccgtcgtttctgtc
gataccgggcttagccacctgacagcggcactggatcgtcccaatatcaccttgtacgga
ccaactgatccgggactaattggcggctatggaatgaaccaagtggtggaaatgtccgaa
agccagaaaatggagacaattcccgctagcctcgtccatcaaaaattagagaagctgata
gaattacctgcatcaggcgagtga
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