Pectobacterium actinidiae: M9782_03215
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Entry
M9782_03215 CDS
T08879
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00860
Porphyrin metabolism
pacb01100
Metabolic pathways
pacb01110
Biosynthesis of secondary metabolites
pacb01120
Microbial metabolism in diverse environments
pacb01240
Biosynthesis of cofactors
Module
pacb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pacb_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
M9782_03215 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pacb04147
]
M9782_03215 (hemB)
Enzymes [BR:
pacb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
M9782_03215 (hemB)
Exosome [BR:
pacb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
M9782_03215 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
WEF12328
LinkDB
All DBs
Position
724050..725072
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AA seq
340 aa
AA seq
DB search
MSTAFPGTFPGRRMRRIRRHDFSRRLVAENQLTVNDLIYPVFVMEGTNHRQEVPSMPGVY
RMTIDVLLKEAEEIAKLGVPVLSLFPVIEADKKSLYAEEAYNPDGLVPRTIRALKDAVPE
LGLLTDVALDPYTTHGQDGIIDADGYVINDVTKELLVRQALSHAEAGAEIIAPSDMMDGR
IGAIRDTLEAQNLINTQIMAYSAKYASCYYGPFRDAVGSAGNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKESFGVPTFAYQVSGEYAMHMAAIQNGWL
QEQPVVMESLLCFKRAGADGVLTYFAKRVAQWLHDQHMQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcttttcccggcactttccccggccgacgtatgcgccgcattcgtcgccat
gatttcagccgtcgcctggttgctgaaaatcaactgacggtgaatgatttgatttatccc
gttttcgtgatggaagggacaaatcatcgtcaggaagttccctcaatgccgggggtatac
cggatgactatcgacgtgcttctgaaagaagccgaagagatcgctaagctcggcgttccg
gtactgtcgctgttccccgttattgaagcggataaaaaatcactctatgccgaagaagcc
tataacccggatggtctggttcctcgcacgatccgcgcgctgaaagacgccgtcccagag
ctgggtttgctgacggatgtggcgctcgatccctataccacacacgggcaggacgggatt
atcgatgcggatggttatgtgattaacgacgtcaccaaggagcttttggtgcgtcaggcg
ctgtcccacgcagaagctggggcagaaattattgcgcctagcgacatgatggatggccgc
atcggcgctattcgcgacacccttgaagcgcagaatctgatcaatacccagatcatggcg
tattcagctaagtatgcatcgtgttattacgggccttttcgtgacgccgtgggttcagct
ggcaatctaaaaggtggtaacaagaaaacctaccagatggatccagccaacagcgatgaa
gccttgcaggaaatcgcgcaggatttgcaggaaggggcggatatggttatggtcaaacca
gggatgccttatctggacgtggtgcgtcgcgtcaaagagtcgttcggtgtgccgacgttt
gcttatcaggtatctggcgaatatgcgatgcacatggcggcgattcagaacggctggttg
caagaacaaccggtggtgatggagtctctgctgtgctttaagcgtgcgggtgcagatggg
gtactgacctattttgctaagcgtgtcgcacagtggctgcacgatcagcatatgcaacgc
taa
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