Pectobacterium actinidiae: M9782_03240
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Entry
M9782_03240 CDS
T08879
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00071
Fatty acid degradation
pacb00280
Valine, leucine and isoleucine degradation
pacb00310
Lysine degradation
pacb00362
Benzoate degradation
pacb00380
Tryptophan metabolism
pacb00410
beta-Alanine metabolism
pacb00640
Propanoate metabolism
pacb00650
Butanoate metabolism
pacb00907
Pinene, camphor and geraniol degradation
pacb00930
Caprolactam degradation
pacb01100
Metabolic pathways
pacb01110
Biosynthesis of secondary metabolites
pacb01120
Microbial metabolism in diverse environments
pacb01200
Carbon metabolism
pacb01212
Fatty acid metabolism
Module
pacb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M9782_03240 (fadB)
00650 Butanoate metabolism
M9782_03240 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M9782_03240 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M9782_03240 (fadB)
00310 Lysine degradation
M9782_03240 (fadB)
00380 Tryptophan metabolism
M9782_03240 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M9782_03240 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M9782_03240 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M9782_03240 (fadB)
00930 Caprolactam degradation
M9782_03240 (fadB)
Enzymes [BR:
pacb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M9782_03240 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M9782_03240 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M9782_03240 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M9782_03240 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
WEF12333
LinkDB
All DBs
Position
complement(729356..731545)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIVELVFSAPGSVNKLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANRIFSRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATTDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIGAGKDISAADALK
VGLVQAVVTNEKLIPAAIKMLKQAIDGSLDWQAYRRPKLDPLKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLIGETSVPQHAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILASIQPTLDYSGFERTDIVVEAVVENPKIKASVLAETESHVSE
NTILASNTSTIPIATLAASLKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDGTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRDIDNIMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGHGFYRYQTDGKGKL
RKEQDETAEALLKDISQPKKAFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVETAQQLAHLGAIYQVPDGLQQKAKNNEGYYPSVAPH
ADVSYGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgtcgagctg
gtattttctgcccctggctccgtaaacaagctagatacccgcaccgttgccagcctgggt
aaagcgctggacgttctggcagaacaaccgaacctgaaggggttgctgctacgttctgac
aaaccggcatttattgttggtgccgatatcacggaattcctttctctttttgccgcaccg
gccgaaaagctgcatgaatggcttgtcttcgccaaccgcattttcagtcgccttgaggat
ttacctgttcccacgctgtccgcgattaatagctatgcgttaggcggcgggtgtgaatgc
gtactggcaaccgactttcgtttagcaacgacggatgcacgcatcggtctgcctgaaacc
aaactggggatcatgccgggatttggcggcaccgttaggctaccacgcctactgggcgca
gacagcgcgctggagatcatcggcgcaggtaaagatatcagcgcagccgatgccttaaaa
gtgggactggtacaggccgttgtcaccaatgaaaagctgattcccgccgccatcaagatg
ttgaaacaggcgattgacggttcactggactggcaggcttaccgacgtccgaagcttgac
ccgctgaagctcaataagattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctgcaaaccgctggcaagcactatcccgcaccgatgctagcggtaaaaaccatcgaagcc
gccgcgaccatgacgcgcgatgacgcattgcaactcgaaacacagcattttgttcaactg
gcacgttcaaatgaagctcgcgcactcgtcggtattttcctaaacgatcaatatgttaaa
ggaaaagcgaagaaactgattggcgagacatccgtgccccagcacgccgccgtgttaggt
gcgggcattatgggtggtggcattgcctatcaatccgcgttcaaaggcgtgccgattcgg
atgaaagatatcaacgagaaaccgcttgcgctggggatgaatgaggcagccaagctactg
aataagcagatggaacgaggcaagctggatggaatgaaaatggcgacgattctggcgagc
attcagccaacgctggattattccgggttcgagcgtaccgacatcgtggttgaggccgta
gtggagaacccgaaaatcaaagccagcgtactcgcggaaacggaatcgcacgtgagtgag
aatacgattctggcttcgaatacctcgaccatcccgattgctacgctggcggcatcgtta
aaacgaccgcaaaatttctgcgggatgcacttcttcaacccggtacaccgcatgccgctg
gtcgaaattattcgcggtcccaaaaccagcgacggcaccatcgccagcgtggtggcttac
gccagcaagatgggcaaaacaccgatagtcgtgaacgactgccccggattcttcgtgaac
cgggtgctattcccctactttgcggcgttcagcctactgctcagggacggtgccgatttc
cgcgatatcgataacatcatggagaaaaaattcggttggccgatggggccggcctatctg
ctggacgttgtcggtattgataccgctcaccatgctcaggccgtgatggctgagggcttc
ccacagcgcatggcgaaagattatcgcgatgcgattgatgtgctgtttgaacaccagcgc
ttcggacagaagaatggtcacggcttctaccgttatcaaaccgatggcaaggggaaattg
cgtaaagaacaggatgagactgccgaagcactacttaaagacatcagccagccgaaaaaa
gcgttcagtgcagaagagattatcgctcgcatgatgatcccgatgattaatgaagtcgcg
cgctgtctggaagaaggtatcgtcgcgagccccgccgaagcggacatggcgttggtatac
gggttaggtttccctcccttccacggcggagcctgccgctatctggataccctaggcagc
gaacgttatgtcgaaacagcgcaacagttggcacacctcggcgcaatctatcaggtgcct
gacggcttgcagcaaaaagccaaaaataatgaaggctattatccatcggtcgcaccgcac
gcggacgtttcttacggccaaccggcatga
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