Pectobacterium actinidiae: M9782_03415
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Entry
M9782_03415 CDS
T08879
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00730
Thiamine metabolism
pacb01100
Metabolic pathways
pacb01240
Biosynthesis of cofactors
Module
pacb_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
M9782_03415 (thiC)
Enzymes [BR:
pacb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
M9782_03415 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WEF12357
LinkDB
All DBs
Position
complement(767007..768986)
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AA seq
659 aa
AA seq
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MSTEPLSIKSSSVKTELSTASKSGRREQRAAAQQFIETLQGTAFPNSKRIYLTGSRDDIH
VPMREIQLSPTLLGGSKDNPQYEPNEPIPVYDTSGPYGDPAAQPDVRVGLAKLRASWIAE
RHDTEALSGVSSDFTQQRLADAGLDHLRFEHLPNPLRAKTGKRVTQLHYARQGMITPEME
FIAIRENMGRERIRGEVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPES
EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI
LRNSPVPIGTVPIYQALEKVNGVAENLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPM
TAKRLTGIVSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGLRPGSIQD
ANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLG
PLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHA
ADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKVAHFCSM
CGPKFCSMKISQEVRDYAAKQEAEAKPIEIGMAQMSQEFRSRGSELYHSATSLQTEESK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaccattgtctataaaatcctcgtcggtaaagacagaattatctacagca
tccaaatccggtcgccgtgaacagcgtgccgccgcccagcagtttattgaaaccttacag
ggaaccgcctttcccaattccaaacgcatttaccttacgggttcacgcgatgacatccac
gtaccgatgcgggagattcagcttagcccgacgttacttggcggcagtaaagacaacccc
caatacgaacccaacgaacccattccggtttacgatacgtcagggccttatggcgatcct
gctgcgcaacccgatgtccgcgttgggctagccaagctgcgcgccagctggattgcagaa
cgtcatgacactgaagcgctatccggcgtcagttccgatttcacccaacagcgtctggca
gatgccggtttggatcatctgcgttttgaacacctgccgaatccgctgcgtgccaaaaca
ggaaaacgcgtcacccaactccactatgcgcgacagggcatgattacgcccgaaatggaa
tttatcgccattcgtgaaaatatgggacgcgaacgtattcgcggcgaggtactgcgccag
cagcatccggggcaaagtttcggcgcccttctgccagaaaacatcacgccagaatttgtt
cgtcaggaagtggccgccgggcgcgccattattccctcaaacatcaatcaccccgaatca
gagccgatgattatcggtcgcaattttctggtgaaggttaacgctaatatcggcaactca
gccgtaacgtcttccatcgaagaagaggtagagaaactggtctggtctacccgctggggc
gcagatacggtgatggatctctcaactggccgctatattcacgaaacccgcgagtggatt
ctgcgtaacagccccgtgccgatcgggacagtgccgatttaccaggcgttggaaaaagtg
aacggcgtggcggaaaacctgaactgggaaatgttccgcgatacgctgctggaacaggca
gaacagggcgtggactatttcaccatccacgctggcgtgctgttgcgctatgtgccgatg
acggccaaacgcttgaccggcatcgtctcacgcggcggttccattatggcgaaatggtgc
ctgtcgcatcacaaagagagcttcctgtacgaacacttccgcgaaatctgtgaaatctgt
gccgcttacgacgtcgcactgtcgctgggtgatggtttacgtcccggctcgattcaggat
gctaacgacgaggctcagtttgccgaacttcatacgttaggtgagctgaccaaaatcgcc
tgggaatacgacgtacaggtgatgatcgaaggccccggccacgttccgatgcagatgatc
cgccgcaacatgaccgaagagctggagcactgccacgaagcgccattctatacgctcggc
ccgctgacgaccgatatcgcaccgggttacgatcacttcacctctggcatcggtgccgcc
atgattggctggttcggctgcgcgatgctctgttatgtcacaccgaaagagcatcttggc
ttgccgaacaaggaagacgtcaaacagggactcattacttataagatcgccgctcatgcc
gccgatctggcgaaaggccaccccggcgcgcagattcgtgataacgccatgtcaaaagca
cgtttcgaattccgctgggaagatcagttcaatctggcgctcgatccccaaaccgcccgt
gcctaccacgatgaaacgctgccgcaggaatccggcaaagtcgcccacttctgttccatg
tgcggccctaaattctgctcgatgaaaatctcacaggaagtgcgcgactacgccgcaaaa
caagaagcggaagccaaaccgattgagataggtatggcgcagatgtcgcaagaattccgc
tcgcgcggcagcgagctttatcacagcgccaccagcctgcaaaccgaggaaagcaaatga
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