Pectobacterium actinidiae: M9782_04170
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Entry
M9782_04170 CDS
T08879
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00230
Purine metabolism
pacb00240
Pyrimidine metabolism
pacb01100
Metabolic pathways
pacb01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
M9782_04170 (nrdD)
00240 Pyrimidine metabolism
M9782_04170 (nrdD)
Enzymes [BR:
pacb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
M9782_04170 (nrdD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
PSV_ORF131-like_dom
UPF0004
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
WEF12495
LinkDB
All DBs
Position
complement(929152..931290)
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVPFDEVRIKEAVERAAHAAGVNDADYCATVACAVAQQMQNKSRVDIRD
IQDAVENLLMSGNYKKLARTYIEYRHDRDIARERHGRLNQEIRGLVEQSNMALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQYILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
NGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVTASH
AKHKAIAEEWQIPDADNYALTRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTT
WESRLIQESILRNRIAGLGKNHKTAVFPKLVFAIRDGLNHKAGDPNYDIKQLALECASKR
MYPDILNYDQVVNVTGSFKTPMGCRSFLGVYEENGQQIHDGRNNLGVISLNLPRIALEAE
GNEDRFWTLLDQRLVLAKKALMTRIARLESVKARVAPILYMEGACGVRLKADDSIADIFK
NGRASISLGYIGLHETINALFGNQTHVFDDNALRAKAVAVITRLKAATEQWKDETGYGFS
LYSTPSENLCDRFCRLDTAEFGVVQGVTDKGYYTNSFHLDVEKKVNPYQKIDFELPYPPL
ANGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFECTSKGF
TCPKCGNHDSARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRIKHLGNGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaaacgggacggttgccaggtgccttttgatgaagtgcgcatc
aaagaggcggtcgaacgcgcggcacatgcagccggtgtcaatgatgcagactactgtgca
actgtggcctgtgcggtcgctcaacaaatgcagaataaatcgcgcgtggatatccgcgat
attcaggacgcagtcgaaaacctgctgatgtccggcaattacaaaaaactggcgcgtacc
tacatcgaataccgtcatgaccgcgatattgcgcgtgaacgccacggtcgcctgaatcag
gaaattcgcggtctggtcgagcagagcaacatggcgctgctgaacgagaacgccaacaaa
gacagtaaagtgatccccacccagcgcgatcttctggcgggtattgtcgccaagcattac
gccaaacagtacatcctgccgcgtgatgtggtactggcgcacgaacgcggtgagattcac
tatcacgatctcgactactcaccctttttcccgatgtttaactgcatgctgatcgacctg
aacggcatgctgaccaacggtttcaaaatgggtaacgcggagattgagccaccgaagtct
atctcaactgcgactgccgtcacggcgcagattatcgcgcaggtcgccagccacatttat
ggcggcactacgattaaccgtatcgatgaaattctggcaccgttcgtcaccgccagccat
gcgaaacataaagccattgcggaagaatggcagatccccgatgcggacaactatgcctta
actcgcacggaaaaagagtgctacgacgcgttccagtcactggaatacgaagtcaacacg
ctccacaccgctaacggccagacgccgttcgtgacctttggcttcggactcggcaccact
tgggaatcgcgtctgattcaggaatccatcctgcgcaaccgcattgccgggctgggtaaa
aaccacaaaacggcggtattcccaaaactggttttcgctatccgcgacggtctgaaccac
aaagcaggcgatccgaattacgatatcaaacagctcgcgctggagtgcgccagcaagcgc
atgtacccggatattctgaactacgatcaggtcgtgaacgtcaccggttcgtttaaaacg
cctatgggctgccgcagcttcctcggcgtttatgaagagaacggccagcagattcacgat
ggtcgcaataacttaggcgtaatcagcctgaacctgccacgcatcgcgctggaggccgaa
ggcaatgaagatcgcttctggacgctgctcgaccaacgtctggtgctggcgaaaaaagcg
ctgatgacacgtattgcacgtctggaaagcgtgaaagctcgcgttgcgccaattctgtat
atggaaggggcttgcggcgtgcgcttaaaagcggacgacagcattgcggacatcttcaag
aatggacgcgcctcaatttcgctgggctatatcggcctgcatgaaacgattaacgcgctc
ttcggtaaccaaacgcatgtctttgatgacaacgcgctgcgtgccaaagccgtggccgtt
atcactcgcctgaaagccgccaccgaacagtggaaagacgaaacggggtatggcttcagc
ctgtacagcacgccgagtgaaaacctgtgcgaccgcttctgccgtttggataccgctgag
tttggcgtcgtgcagggcgtgacggacaaagggtattacaccaacagtttccatcttgat
gtggagaagaaggtgaacccttaccagaaaatcgactttgagctgccctatccgccgctg
gctaacggtgggttcatttgctacggcgaatacccgaacctgcaacacaacctcaaagcg
ctggaagacgtatgggattacagctacagccgcgtgccttactacggcaccaacacgccg
atcgacgaatgctacgagtgtggcttcactggtgaattcgagtgcaccagcaaaggcttc
acctgcccaaaatgcggcaaccacgattcggcccgcgtttccgtcacgcgccgcgtgtgc
ggctacctcggtagcccggatgcacgcccattcaacgccggtaagcaggaagaagtgaag
cgtcgaatcaagcatttaggcaacggtcaactggggtga
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