Pectobacterium actinidiae: M9782_05410
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Entry
M9782_05410 CDS
T08879
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pacb03009
]
M9782_05410 (rlmE)
Enzymes [BR:
pacb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
M9782_05410 (rlmE)
Ribosome biogenesis [BR:
pacb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M9782_05410 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Reovirus_L2_MT1
Methyltransf_23
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
WEF12726
LinkDB
All DBs
Position
1211891..1212520
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AA seq
209 aa
AA seq
DB search
MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA
APGGWSQYVVTQIGGNGRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDSKVQV
VMSDMAPNMSGTPAVDIPKSMYLVELALGMCRDVLAPGGSFLVKVFQGEGFDEYLREIRS
LFTKVKIRKPDASRARSREVYIVATGRKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaaaagcgttctgcaagctccagtcgctggttgcaggaacactttagcgat
aaatatgtgcagcaagcccagaaaaaagggctgcgctcccgtgcttggtttaaacttgac
gaaatacagcaaggcgacaaactgtttaaacccggtatgaccgttgtggatttaggcgct
gcgccgggcggttggtcacagtatgtggtcacgcaaattggtggaaatggtcgaattatc
gcgtgtgatattttaccgatggatccgattgtcggcgtcgatttcctgcaaggggacttt
cgtgatgaattagtcctcaaggccttgctcgaaagggttggcgatagcaaagttcaggtg
gtgatgtctgacatggcccctaacatgagtggtacaccagccgttgatattccgaagtcg
atgtatctggttgaattagcacttggtatgtgtcgggatgtattagcgccaggcggaagt
ttcctggtgaaagtgtttcagggagaaggttttgatgaatacctgcgggaaattcgctcc
ctgtttacgaaagtgaaaattcgtaaaccagacgcctcacgtgcccggtctcgtgaagtg
tatattgtagcgacagggcggaaactgtag
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integrated database retrieval system
