Pectobacterium actinidiae: M9782_05540
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Entry
M9782_05540 CDS
T08879
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9782_05540 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacb03019
]
M9782_05540 (pnp)
03016 Transfer RNA biogenesis [BR:
pacb03016
]
M9782_05540 (pnp)
Enzymes [BR:
pacb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M9782_05540 (pnp)
Messenger RNA biogenesis [BR:
pacb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9782_05540 (pnp)
Transfer RNA biogenesis [BR:
pacb03016
]
Prokaryotic type
tRNA degradation factors
M9782_05540 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
DUF4172
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WEF12750
LinkDB
All DBs
Position
1245610..1247730
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGAARVGYLNDQYVLNPTMDELKESRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHEQQQIVIQNINSLVAEAGKPKWEWHAPDVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVDVIKADVVAALQAEDETLNAGEIQEILGNV
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANAPTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagttccaatatggtcagcataccgtcacgttagagacg
ggtatgatggcacgccaggctaccgccgctgtgatggtaagcatggatgacaccgcggta
ttcgttaccgttgttggcgccaaaaacgccaaacccggccaaagtttcttcccattaacg
gttaactatcaggagcgtacttacgctgctggacgtttccctggtggttttttccgccgt
gaaggccgtccaagcgaaggcgaaacgctgatttcccgcctgatcgaccgcccgattcgc
cctctgttcccagaaggtttcctgaatgaagttcaggtgattgcgaccgtcgtttctgtt
aacccgcaggttagccctgacatcgttgccatgattggtgcctctgcggcgctgagcctg
tctggtattccgttcaacggccctattggtgcggcgcgtgttggttacctaaacgaccag
tatgtcctgaacccaacgatggatgagctgaaagaaagccgtctggatctggtggttgcc
ggtacagaaggcgcggttctgatggtggaatccgaagccgatctgctgagtgaagatcag
atgctgggtgctgtggtgtttggtcacgagcaacagcagatcgttatccagaacatcaac
tcactggttgctgaagcaggcaaaccgaagtgggaatggcatgcaccagacgttaacgtt
tctttagagcagcgtgtacaggctttgtctgaagcacgtctgggtgacgcttaccgcatc
actgaaaaacaagagcgttatgcacaagtcgacgtcatcaaagctgatgttgttgccgct
ctgcaagccgaagacgaaacactgaatgcgggtgagatccaggaaattctgggtaacgtt
gagaaaaatgtcgtacgtagccgtgtgctggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtgcgtactggcgtactgccgcgaactcacggttct
gcactgttcacccgtggtgaaacgcaggcgttggtaacggctacattgggtacagagcgt
gatgcgcagaatatcgacgaactgaccggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactctgttggtgaaaccggtatggtcggttcacctaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgtggcgtattggcagtcatgccgaaggcgaacgaa
ttcccgtacaccgtgcgtgtagtgtctgaaatcacggaatccaacggttcttcttctatg
gcgtctgtctgcggtgcttctctggctctgatggatgctggtgtgccgatcaaatcagcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgttctgtccgac
attctgggtgatgaagaccacctgggcgatatggactttaaagttgccggtagccgtgaa
ggtatcaccgcgctgcagatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgctttgaatcaggccaaaggtgcacgtttgcacattctgggcgtgatggagcaggcg
atcagtacgccgcgtggcgatatctctgaattcgcaccgcgtattcacaccatcaagatc
agcaccgataagattaaagacgtgatcggtaaaggtggttcagtgattcgtgcgctgacg
gaagaaacaggcacgactattgaaatcgaagacgatggtacagtgaagatcgcttcaacc
gacggcgaaaaagcgaaacacgcgattcgtcgtattgaagagatcactgccgaaatcgaa
gtcggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgtcgct
attggcggcggcaaagaaggcctggtacatatttctcagatcgccgacaagcgcgtagag
aaagtgactgactacctgcaaatgggtcaggaagtaccggttaaggttctggaagttgat
cgtcagggccgtgtgcgcttaagcatcaaagaagccaatgcgccaactcaggaagcggca
gccccgtcttctgaggaataa
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