Pectobacterium actinidiae: M9782_06055
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Entry
M9782_06055 CDS
T08879
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
M9782_06055
Enzymes [BR:
pacb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
M9782_06055
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
WEF12846
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Position
1368567..1370297
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AA seq
576 aa
AA seq
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MKRSVLLLVGVMLAPYGYSAQDNAVSLSVSGLNTVLDNGLLKVAFGEDGSAVSMVTGGKN
IVTNLSGAARDPSKTRSAYLDYYVNDAHAKGVKDFVPDRIEVLRNDRDIAHVAYIDDRDG
LLRLEYHLIMRRGVSGLYSYVVAENRGNQDVKVSELRNVYRFDPARLDHLYNGDRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGSMRAAPFWGVFGNGVGAWLIHGNREYFSG
DALKQELLVHQDAIILNYMTGAHLGTPDMIAPPGWKKFYGPWLLYINQGDTGHMLADAQR
QAMTETVNWPYKWVNDARYPIERTLVSGRVASQQSVTVVLSSSLDEPFDVQTRGYSYQAI
TDTQGNFSIPHVRPGNYHLAVYANSGTQPGILAEQTLSVSGDNQTLPMITLPKAESVVWA
IGQANRQANEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQ
PEKKTYFLNIALAAASNSGMSEPTVPQLAVVVNGSTLETLTYGNDKTIYRGALQSGRYHI
ARIPVSSRFLKNGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggagtcatgctggcaccctatggctacagcgcg
caggataatgccgtgtcattatccgtttctggtttgaataccgttctggataacggcttg
ctgaaagtcgctttcggagaagatggcagcgcggtgagcatggtgacgggaggcaaaaat
atcgtcaccaacctgtccggtgcggcgcgcgatccgagtaaaacgcgtagcgcttatctc
gattactatgttaacgatgctcatgctaaaggcgtcaaagattttgtccccgatcggata
gaggtgctgcgcaacgatcgagatatagcgcatgtggcctatatcgacgatcgggacggg
ctgttacggctagaatatcacctgattatgcgtcgcggcgttagcgggctttatagctat
gtggtggccgagaatcgcggaaatcaggacgttaaagtcagtgaattgcgtaacgtctat
cgcttcgatcctgcccggttagatcatctctacaacggggatcgtcaaggtaagccgctg
ctctacagccagcttgaagcgtcgccgaaggtgcaggatgaaacctggcgattgccggat
ggcagcatttattccaaatatgattttgctggctctatgcgtgccgcgcctttctggggc
gtttttggtaatggcgtgggggcgtggctgattcacggcaatcgggagtatttctccggc
gatgcgctcaagcaggagctgctggtgcatcaggatgcgattattctgaactatatgacg
ggggcgcatctcggcacaccggatatgatagccccaccgggctggaaaaaattctacggt
ccgtggctgctgtatatcaatcagggtgataccggacacatgctggcggatgctcagcgt
caggcgatgacggaaaccgtcaactggccatacaaatgggtgaatgatgcccgttatccg
attgagcgcacactggtgagcggacgcgttgccagccagcagtcggtaaccgtggtgctt
tcgtcatcgctggatgagccgttcgatgtgcaaacccgtggctattcgtatcaggcaatc
accgatacacagggaaatttttcaattcctcatgtccgtccgggaaattaccatcttgct
gtgtatgccaacagcggtacgcagccggggatattggcggagcaaacgctatccgtttct
ggtgataatcaaacgctgcctatgataacgctaccaaaagccgaatcggttgtttgggct
attggacaggcaaatcggcaggcgaatgaattccgctttggcaatgaggcacgtaacacc
cgctggcagcatgaggttccggcaaacctgacgttcgatattggccgcagcgattatcaa
cgtgactggtattacgcgcagaccaaaccgggaaaatgggatatccgttttgctctgcaa
ccagagaagaaaacctatttcctgaatatcgcactggcggccgcgagtaacagcggaatg
agcgaaccaacagtgccgcaactggcggtcgtggtaaacggcagcacgctggaaacactg
acttacggaaacgacaaaaccatttatcgtggcgcgttacaaagcggtcgctatcacatc
gcccgtatcccagtgtcatcccgctttctgaaaaacggcaacaatacgatcacgctgcaa
ttaaaaggcggcagcgtgatgtatgacgtggtgacgttaagcgaggagtaa
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