Pectobacterium actinidiae: M9782_06090
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Entry
M9782_06090 CDS
T08879
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M9782_06090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacb03021
]
M9782_06090
Transcription machinery [BR:
pacb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9782_06090
BRITE hierarchy
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_28
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WEF12852
LinkDB
All DBs
Position
1379886..1380410
Genome browser
AA seq
174 aa
AA seq
DB search
MKSPAAVCLHQPETLNVQQIYHDHHAWLQAWLRRRLGCSQQAADLAQDTFLRLVCLHQAD
RIREPRAWLTTVAHGLVVNHWRRRDIENAYLQVLAEQAFTFSPSLEQQVMVVDALMAIDQ
MLATLPGKVRQAFLLVHLDGLTYRQVAEQLAVSERMVKKYMAQAMLNCLLCQDL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagtcccgccgctgtctgcctccatcagcctgaaaccttaaacgttcagcagatt
tatcatgaccatcatgcctggttacaggcgtggctgcgtcggcgtttggggtgttcacag
caggctgcggatctggcacaggatacgtttctacgtttggtctgcctgcatcaggccgat
cgtatccgtgaaccacgtgcctggttgacgactgtcgcccacgggctggtggtgaatcac
tggcgacgtagagatatcgagaatgcctatcttcaggtgctggcagagcaggcgtttact
ttttctccctcgctggaacagcaggttatggtggttgatgcgttgatggccatcgaccag
atgctggcgacgctaccgggcaaagtgcgtcaggcattcttgctcgtgcatctcgatggc
ctgacctatcggcaggttgctgaacaattagccgtttccgagcggatggtgaaaaaatat
atggcacaggcaatgctgaattgtctattgtgtcaggacttatga
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integrated database retrieval system
