Pectobacterium actinidiae: M9782_07145
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Entry
M9782_07145 CDS
T08879
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M9782_07145 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_07145 (recD)
Enzymes [BR:
pacb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M9782_07145 (recD)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9782_07145 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
Herpes_Helicase
MukB
AAA_28
UvrD_C
PhoH
Bcl-2
AAA_17
DEAD
CbiA
T2SSE
DUF87
TrwB_AAD_bind
FtsK_SpoIIIE
Zeta_toxin
SRP54
AAA
ADK
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
WEF13046
LinkDB
All DBs
Position
1627524..1629383
Genome browser
AA seq
619 aa
AA seq
DB search
MIALLETALARRLLRPLDVQFARMLADETQPDLLLAAACLSAHSGAGHVCLPLENLQAQT
LFDGREPELAQQLLAGTGLNTVAAWQQRLRASDAVSDGSKPTPLVLQGEKLYLQRSWQSE
GRVARFIASERDTISVDESAIRAVLDRLFPDSGEEINWQKVAAAVALTRRIAVISGGPGT
GKTTTVAKLLAALIELNTGDALRIQLAAPTGKAAARLTESLGLALHRLAVDPRLREAFPQ
EATTLHRLLGAVTDSQRLRHHQDNPLHLDVLIVDEASMVDLPMMANVIAALPPHARIIFL
GDRDQLASVEAGAVLGDICRFAEAGYSRARAQQLQRLTGCTLDESGPEGQSTVSDSICLL
RRSYRFDPHSGIGQLALAVNGGDDTRVREVLTGKFSDITCSPLTEAEEYQAMLAQCVEGY
RDYLQHVAAGSTPDAVLLAFQRYRQLCALREGPFGVAGLNQRIEQALHQAGLIQRSRNPL
NRWYPGRPVMIERNDAALGLFNGDIGIAMIGESGELRVFFPLPNGETKDVTPSRLPPHET
AYAMTVHKSQGSEFDHTALVLPNHYLPVLTRELVYTAITRARQRLSLYTDVRILCRAVKT
PTQRYSGLEERISALMVSP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgttgcttgaaacggcactggctcggcggttgctgcgcccgttggatgtacag
ttcgccagaatgctggcggatgagacacagcccgatctgttgttggctgccgcctgcctg
agtgcgcactcgggggcaggacacgtgtgtttaccgctggagaacttgcaggcgcagacg
ctgtttgacggccgtgagcctgaactggcgcaacagctgcttgcggggacaggactaaac
acggttgccgcgtggcagcagcgcttacgggcgtccgatgccgtcagcgacggtagcaag
ccgacgccgctggtgctgcaaggagaaaagctgtatttacagcgcagctggcagagtgaa
ggccgcgtggcacgttttatcgccagcgagcgcgatacgatctccgtcgatgaatctgca
attcgggcggttttggatcggctctttcctgactcgggcgaagagattaactggcagaag
gtggccgcggctgttgcgttgacgcgccgcattgcggttatttctggcgggccaggaacg
gggaaaaccacgacggtggcgaagttgttagcggcactgattgagctgaatacgggagat
gcgttacgtattcaactggctgcgccgaccgggaaagcggctgcgcggctaacggagtcg
ctggggctggccctgcaccgtctggcggtagatcctcggttgcgggaagcgtttccgcag
gaagcgacaacgctgcatcgtcttttgggggcggtgacggacagccagcgcctgcgtcac
catcaggacaacccgctgcatttggatgtgctgattgtggatgaagcatcgatggtcgat
ctgccgatgatggcgaatgtgattgctgcgcttccgccacacgccagaattatttttctg
ggcgatcgcgatcaattggcgtccgtcgaggcgggagcggtgttgggcgatatctgtcgt
tttgccgaagctggctatagccgtgcacgagcacaacagttgcaacgattgacgggctgt
acgctggatgaaagtggtcctgaagggcagtcgacggttagcgacagtatttgtctgtta
cgccggagctaccgtttcgatccgcattccggtattgggcaactggcgctggcggtcaac
ggtggcgatgatactcgcgtgcgtgaggtgctaactggaaaattttccgacattacctgt
agtccgttaaccgaagctgaagagtatcaggccatgttggcgcagtgtgtcgaagggtat
cgtgattatctacagcatgttgcggcaggctcaacgccggatgccgtgctgcttgccttc
cagcgttatcgccaactgtgcgcgttgcgtgaagggccgtttggcgtagcaggactgaat
cagcgcatcgagcaggctttgcatcaggcagggctgattcagcgcagccgtaatccgctt
aaccgctggtatcctggccgaccggtcatgattgaacgcaacgatgccgcattggggctg
ttcaatggtgatatcggtatcgccatgataggagaaagcggggagctgcgcgtatttttc
cccttgccgaatggcgaaaccaaagacgttacgccaagccgcctgccgccgcatgaaacc
gcttatgcgatgacggtgcataaatcgcagggatcggagttcgatcatacggcgctggtg
ctgccgaaccactatttaccggtgctaacgcgggagttggtgtataccgctatcacgcgt
gcgcgccagcgtttgtcactctataccgatgttcgcattctctgccgggcggtgaaaacg
ccaacgcagcgctatagcggcttggaagagagaattagcgcactgatggtgagtccttga
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