Pectobacterium actinidiae: M9782_07530
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Entry
M9782_07530 CDS
T08879
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00040
Pentose and glucuronate interconversions
pacb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M9782_07530
Enzymes [BR:
pacb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
M9782_07530
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WEF13113
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All DBs
Position
1713465..1714673
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AA seq
402 aa
AA seq
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MEYKSGKQVLSLSLGLLGLFSASVFASDSRTVNEPKAPSSCTLLKADGSTATSTIQKALN
NCGQGKAVKLSAGSSSIFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFENAPSSCGVVDK
NGKGCDAFITATSTTGSGIYGPGTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLI
QINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITI
AHSNISTGDDNVAIKAYKGRSETRNISILHNEFGTGHGMSIGSETMGVYNVTVDDLAMTG
TTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGNNIPDWSDITFKDIT
SQTKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVTVKK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaatacaaatcaggcaagcaagttttatcattatcattggggctattgggtctgttc
agcgcatcggtatttgcttctgattcccgaacggtgaatgagccgaaagcaccgtcttcc
tgtacgctacttaaagcggacggtagtacggccacgagtacgattcaaaaagcgctgaat
aattgcgggcaaggaaaagcggtaaagttgagtgcagggagttcgtccatttttctgagc
ggtccgctttcgctaccttctggcgtgagcttattaatcgataaaggggtaaccctacgt
gcggtgaataacgccaaatcttttgagaacgcaccatcatcctgtggcgtggtggataaa
aacggtaaaggctgtgatgcgtttattaccgcgacgagtacgacaggtagcggaatctat
gggccgggcaccattgatgggcaagggggcgtgaagcttcaggataaaaaggtgagctgg
tgggatctggctgctgatgccaaagtgaaaaagttaaaacagaataccccccggctgatt
cagattaataagagcaagaacttcacgctgtataacgtttctctcattaattctccgaac
ttccatgtggtgttcagcgatggtgatggtttcaccgcgtggaaaaccacgatcaaaacg
ccgtccaccgccagaaacaccgacggtatagatccgatgtcgtcgaaaaacatcaccatc
gcccacagtaacatttcgacgggcgacgataatgtggcgatcaaagcctataaaggccgt
tctgagacacgcaatatttccattttgcataacgaattcggaacgggacatggcatgtcg
atcggtagcgaaacgatgggggtttataacgtgacggtcgatgatctggctatgactggc
accacgaatggcttacgtattaaaagcgataaatcggcagccggcgttgtcaatggcgtt
cggtatagcaacgtggtcatgaagaacgtagcgaaaccgatcgtgattgatacggtgtat
gagaaaaaagagggaaataatatccctgactggagcgacattacgtttaaggatattacg
tcccaaaccaaaggcgtggtggtgctaaacggcgagaatgcgaaaaagccgatagaagtg
acgatgaagaacgtcaaactgacgagcgacagtacatggcaaatcaagaacgtcaccgtt
aagaagtag
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