Pectobacterium actinidiae: M9782_07540
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Entry
M9782_07540 CDS
T08879
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
M9782_07540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pacb02000
]
M9782_07540
02044 Secretion system [BR:
pacb02044
]
M9782_07540
Transporters [BR:
pacb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
M9782_07540
Secretion system [BR:
pacb02044
]
Type I secretion system
Adhesin protein transporter
M9782_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_22
CLP1_P
RsgA_GTPase
SMC_N
AAA_29
AAA_18
DUF87
MMR_HSR1
TsaE
Peptidase_C39
ATP-synt_ab
AAA_30
cobW
AAA_10
Spectrin_Dys-1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WEF13115
LinkDB
All DBs
Position
complement(1716173..1718302)
Genome browser
AA seq
709 aa
AA seq
DB search
MTQVTQTEVWIAAMARAAAHYGQVVDTQSVRQQMRWYEQQPIARQLEQISHLMGLSISLR
HREKLRWRNQILPVLAETDDGGVIVIESLNDEGIATYWLNDGGDLQREAELTELIKHSQG
IIVLVGIAERGRDTRIDDFVKPYRKHWFWQHFRGAKRQIGEISLASVVGNVLALAGILFS
MQVYDRVIPAQSIPTLWVLFFGVLLAAALEYAIRLSRTVVSDLMGKSIDLNVSGMLFARA
LAIKNEARPKSTGSFISQLREIDQVRELLTSTTVGAAADMPFVLLFLGIMAMIGGPLVFI
PMLAIPLIVIPGLMLQWPMAKLAKEGMRESALRNAVLVESIEGIEDIKALQAEPYFQRQW
EQTHEVSASIGMKQRVWGARLSGWASTVQQLTYAGMLVFGCYLVMAGDITTGTLVACSLL
SSRTIAPLMQLTMVFSRWQHAKTAMTGLDDILQKPLDRPEDGKMAHCPILQGHFQLHNLQ
YSYDPEKGDTALQVGKLEIKPGEKVALLGKVGAGKSTLLKLLANQATATRGKVIIDGVDI
SQIDPADVRRQLGFLSQESRLFFGSLRQNLMLGNPHATEQELLQALRISGALSLIQQDAA
SLDRLIHEGGRGLSGGQRQMILLSRMLLRNPQIVLLDEPTASMDEQLESHVIHQLSSWLT
GRTLVLVTHRPALLKLVDRVVVMDGGRIVADGPRDQILKAISKPAQSVA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagtcacccaaactgaagtctggattgccgcgatggctcgcgccgccgcccac
tatggacaggtagtggatacccagtcggtacgccagcagatgcgctggtacgaacagcag
ccgattgcccgccagttagaacaaatcagccatctaatggggttgagcatcagcctgcga
cacagggagaaactccgctggcgcaaccagatcttaccggtactggcagaaaccgatgac
ggcggcgtcatcgtcatcgaatcattgaatgatgaaggcatcgccacctactggctaaat
gacggtggcgatcttcagcgcgaagccgaattgaccgaactcatcaaacacagccagggg
attatcgtgctggtcggcatcgcggaacgcggccgcgatacccgtatcgatgatttcgtc
aaaccataccgtaagcactggttctggcaacattttcgcggcgcaaaacgacagatcggg
gaaatctctctggcctctgtcgtaggtaacgttctggcgctggcggggatcctgttttcc
atgcaggtgtatgatcgtgtgattccggcgcagtccattcccacgctgtgggtgctgttt
ttcggcgtgctgctggccgctgcattagagtacgccatccgtttgtcacgcaccgttgtc
tccgatttaatgggcaagagcatcgatctgaacgtgtcgggtatgctattcgcccgcgcg
ctggcgataaaaaatgaagcgcggcctaagtctaccggctcgtttatttcgcagctgcgg
gaaatcgatcaagtgcgtgaactgctgacctcaacgaccgtcggggcggccgctgacatg
ccgttcgtcttgctgtttctcggcatcatggcaatgattggcggcccgctggtatttatt
cccatgctggcgatcccgctgattgtgatccccggcctgatgctgcaatggccgatggcg
aagctcgccaaagaaggcatgcgcgaaagcgccttgcgtaatgcggtgctggtcgagtcc
atcgaagggatcgaagatatcaaagcgctacaggccgaaccctactttcagcgtcagtgg
gagcaaactcacgaagtcagcgcctccatcgggatgaaacagcgcgtgtggggggcacgg
ctcagcggctgggcatcgaccgtccaacagctcacctatgctggcatgctggtcttcggc
tgctatctggtgatggcaggtgacatcaccaccggtacacttgtggcctgtagcctgctt
tcctcccgcaccatcgccccgctcatgcagctcacgatggtgttttcccgctggcagcat
gcgaaaaccgccatgaccgggttggatgatatcctgcaaaaaccgctggatcgaccggaa
gacggcaaaatggcgcactgcccgatccttcaggggcacttccaactgcacaacttgcaa
tatagctacgatcccgaaaaaggcgataccgccttgcaggtcggcaaactggagatcaaa
ccgggcgaaaaagtagcgctgctgggtaaggttggcgcggggaaatccaccttgctcaag
ctgcttgccaatcaggcgacggcgacgcgcggcaaggtcatcattgatggcgtagacatc
agccagatcgatccagctgatgtccgccgccaactgggttttctgtcgcaggaatcacgc
ctattcttcggcagcctgcggcaaaacctgatgctcggcaatccgcacgccaccgagcag
gaattgttgcaggcgctgcgcattagcggcgcactcagcctgatccaacaggatgccgcc
agcctggatcgcctcattcatgagggcggacgcggtttatccggcgggcagcgacagatg
attctgctcagcaggatgctgctacgtaacccccagattgtgctgctggatgaacccacc
gcctcgatggatgaacaattggaaagccacgttatccaccaattaagcagttggctcacg
ggccgcacgctagtcctggtgacacaccgtccggcgctgctcaagctggttgaccgcgtg
gtcgtcatggatggcggacgcatcgtggcagatggcccacgtgaccagattttgaaggcg
atcagcaaaccggcacagagcgtggcgtaa
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