Pectobacterium actinidiae: M9782_07610
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Entry
M9782_07610 CDS
T08879
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_07610
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9782_07610
Archaeal homologous recombinant proteins
M9782_07610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
ABC_tran
cobW
SMC_N
Death_MADD
AAA_21
VirC1
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WEF13129
LinkDB
All DBs
Position
complement(1749856..1753539)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGIGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALNTLQARASGIQLLTDEQRQQVEEQLAELIQQEQRGNIERE
QALTTLRWFEQLTQQHTQLSSTQAQHASAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQESLTLAQRIEQLTGKQAAEQVTLTALRQQEEKAERDVSEHKRVRQQQEQVINEQVV
PLDHRITTLVQQKTQQQDELAKTQARLHADESKQTQAAAEQQQAKQRLEQIQSYRQQYAH
HQQWGEQLPLWRTQFRQLCQLQDEQQKLKQKQAQHTEQSATLQQEAVMLAAQQREQQAGA
DAARQQFIQHDEARQHQEAHQPLSVLQQQFNQRIDQRAERQQLATISDQFQRLHIRKQQY
LAKQGEVQEHISQSEVLKKQQQSEHEQRSQHLADLETLHRQEEHIVKLEAERQRLQAGEP
CPLCGSTEHPAIERYQALQPSETQQRLTALQQEVNQLTTALANTTAQLTAREQQREQLQQ
DIAQLDSEHHALLQQWQDVSERLQVNYSLEQPDEVAAWLAQNEAEEQAIRQQISAREQLQ
KQWQESKDLLTATEALQRELDQKIALNTQQQTSLNITQQETEQSLQNVQQQLTQHIQEIT
QALANVGLLLPEADTQDDWLAQRESEWQDWKAKEQEQSRLVPLLATLDSDLQHLNRSVTE
AKQQLQTQQQQLEQHLALLNTSQQERQALFGDRQIVAVREQLQRTSQQYDDALRVAQSAR
QQTETTLSRLTGELSSTQQQHEQSTRQHESAAERFGQALQQSTFADETTFLNALLDEQER
QTLQAWKEKLYQGLQQAAALHQQAERDLLAHQEKRPASLTEDTTQEAVRQQLAALDETLK
TNLRQQGEFQRQLTDDRQQRQNQQDLLNEIAQSQQMYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgcttaaagaatctcaacgcgctgaaaggcgaatggaaaatc
gatttcacgcaggagccgttttccagcaacggcttatttgccattaccggcccgaccggc
gcggggaaaaccacgctgctggatgcaatctgtctggcgctgtatcacgaaacgccacgg
ctaggtctgctttccgccagccagaatgacctaatgacgcgtaataccgctgaatgtctc
gccgaagtcgaattcgaggttaaaggcatcggatatcgcgccttctggagccagcgtcgg
gcaagaaacgctccggacggcaacttacagtcccccaaggccgaactcgccctcattgaa
gacggcaagattctgtgtgaaaaactcaatgataaaaaagagatgatcacacagctcact
gggctggatttcggccgtttcacgcgttcgatgatgctgtcacaaggacaatttgccgcc
ttcctcaacgcgaaagcagacgatagagcggaactactggaagagctgaccggcacggat
atttacggcctgatttccgaacgcgtctatgacaaacacaaacaggcaaacgtagcattg
aacacgctacaggcacgcgcatcaggcattcaactgttaacagatgagcagcgtcagcag
gtggaagaacagcttgccgagctgatccagcaggagcaacggggcaacatcgaacgtgag
caagcgctgactacgctgcgctggtttgagcaactgacgcagcagcacacgcagttaagc
agcacgcaggcgcagcatgcgagcgccgaatctgccattcagcaggctaaaccgcagctc
gaccgcttaactcacagcgaaccggcagaaaaactgaggccgctacatcaggaacgcgag
cgctatcgacaggagtctcttacgctggcacagcgtattgaacaactgaccgggaagcag
gccgccgagcaggtgacgttaaccgcgctacgccagcaggaagaaaaagcagagcgggat
gtgagtgagcacaaacgggtacgccagcaacaagagcaggtgatcaacgaacaggttgtg
ccacttgaccatcgcattaccacgctggtgcagcaaaaaacgcagcaacaggacgagctg
gcaaaaacacaggctcgcctgcacgccgatgaaagcaaacaaacacaggcagcggcggaa
cagcagcaggctaagcaacggcttgaacagattcagtcttaccgccagcaatacgcgcat
catcagcagtggggagaacagcttcctctgtggcgcacccagtttcggcaattgtgccag
cttcaggacgagcagcaaaagctgaaacaaaaacaggcacagcataccgaacagtcagcc
acgttacagcaagaggctgtgatgctggcggcacagcagcgtgaacagcaagcaggtgct
gatgcagcgcgtcagcagttcatacaacatgatgaagcacggcaacatcaggaagcgcac
cagccgctttctgtcctgcaacagcagtttaatcaacgcattgaccagcgcgctgaacgc
caacagctcgcgaccatcagcgaccagttccagcgtctgcatattcgtaagcagcaatac
ctcgccaaacagggggaggtacaagagcatatcagccagtcagaagtcttaaagaaacag
cagcagtctgagcatgagcagcgcagccagcatcttgccgatctggaaacgctacaccga
caggaagagcatatcgttaagctggaggccgaacggcaacggctacaggctggcgagcct
tgcccgctgtgcggttcgaccgagcatccggccatcgaacgctatcaggcactacagccg
tctgaaacccaacagcgcctgacagcgctacagcaggaagtgaatcagttaacgacggcg
ctggcaaatacgacggcacaattgaccgcacgagagcaacagcgggaacagttgcagcag
gacatcgctcagctcgatagcgagcatcacgccctgctgcaacaatggcaagatgtcagt
gagcgcttacaagttaactactcgctggaacagccagacgaggttgcagcgtggcttgcg
caaaatgaagctgaagaacaggctattcgacagcagatttccgcacgcgaacaattgcaa
aaacagtggcaggaaagtaaggatttactgaccgccacagaggcattgcagcgggaactc
gaccagaaaatcgcactcaacacccagcaacaaacgtcgctaaacattacgcaacaagag
accgagcaatcgctgcaaaacgtacagcagcagctcacgcagcacattcaggaaatcacg
caggcgctggcaaatgtggggcttctgctgccggaagctgacacacaggatgactggcta
gctcagcgcgaaagcgaatggcaagactggaaagccaaagagcaggagcaatctcgctta
gttcctctattagccacgctcgacagcgatcttcagcatctgaatcgcagtgtgaccgag
gcaaaacagcagctccaaacgcagcaacagcagttggaacagcacctcgcgttgctcaac
acaagtcaacaagagcggcaggcgctgtttggggataggcaaatcgtggctgtacgcgaa
caactacaacgaaccagccaacagtatgacgatgcgcttcgcgtggcccagtctgctcgc
cagcaaaccgaaacgacattgagccgcctgacgggagagctgagcagcacgcaacagcag
catgaacagagcacccgccagcatgagagtgcggctgagcgttttggtcaggctttacag
caaagcacgttcgctgatgaaaccacattccttaatgcgctgcttgatgagcaagaacgt
cagacgttacaggcatggaaggaaaagctgtatcaaggcttgcagcaggcagcggcactt
caccagcaggctgagcgggatctactcgcccatcaagaaaagcgccccgcttccctgact
gaagacaccacacaagaagcggtacggcagcagttggcagcgctggatgaaacgttgaaa
accaacctgcggcagcaaggcgagttccagcgtcagttgactgacgatcgacaacagcgt
cagaaccagcaggatttgctcaatgagatcgcccaaagtcagcaaatgtatgacgactgg
agctgtcttaatacgctcatcggctcacagagcgggcataaattccgtaagtttgctcag
gggctaacgttggatcatctggtttatctcgccaatctccagctttcgcgcctgcacggg
cgctatatgctgaaacggaaacccggtgacgatctggagctgctggtgatggatacctgg
caagcggatgccgagcgtgatacgcgtacgctgtccggcggcgagagcttcttagtaagt
ttgtcgctggcgctggcgctatccgatctggtcagccataaagccagcatcgattcgctg
tttctggatgaaggcttcggcacgctggatgccgagacgctggatatcgcgctggacgcg
ctcgataacctgaacgcctccggtaaaaccatcggcgttattagccatgtcgaagccatg
aaagagcgtattccagtacagatcaaggtgcagaaggttaacggattaggcgtcagcagg
ctggcaccgcagtacgccgtttag
DBGET
integrated database retrieval system
