Pectobacterium actinidiae: M9782_07615
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Entry
M9782_07615 CDS
T08879
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_07615 (sbcD)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9782_07615 (sbcD)
Archaeal homologous recombinant proteins
M9782_07615 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WEF13743
LinkDB
All DBs
Position
complement(1753536..1754762)
Genome browser
AA seq
408 aa
AA seq
DB search
MRIIHTADWHLGQYFYTKSRSAEHQAFLHWLIVQVEHHQVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVELQRTGCQLVILGGNHDSVAMLNESRELLACLNTQVIASASDEPAQEVILLE
NRQQQPGALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGATASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTQSEH
IRYSGSPIPLSFDELNSEKSVCLVSFAPDAPAQVEILPIPVTQPMQLIKGSLSDIEQQLA
AFQNYQGDKSVWLDIELNTQDYLSDMQKRIQAMTEHLPVEVLLLRRTREQRLQAITRQDK
ETLNELSVHDVFERRMATETDMEDSRQQRARTLFNQVIDELENSEPAQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagccga
agcgctgagcatcaggcttttctacactggctcatcgttcaggtggaacaccatcaggtc
gatgccattatcgttgcaggcgatatttttgataacggttcgccccccagctatgcacgg
gaaatgtattatagcttcgtggtagaactacaacgcacgggctgtcagctcgttattctc
ggcggcaaccacgattccgtcgccatgctgaatgaatcccgcgagctgctggcctgcctg
aacacgcaggtgattgccagcgccagtgatgagcctgcccaagaggtgatcctgttggaa
aaccgtcagcagcagcccggagccctactctgcgccattccttttttacgtccgcgtgat
gtgttaaccagcaaagccggacaatccggagatgaaaaacagctggcgctacaggaagcg
attaccgcgcactaccaacagtgttaccaactggcttgccaaaagcgcgacgaactaggc
ttaccgttgccgattattgcaaccggacacctgacgacgattggcgcgaccgcctcagaa
tccgtacgcgatatctatattggcacgctcgatgccttccctgctcaggcttttccgcca
gcggattatatcgcgctggggcatattcatcgcccacagcgtgtgacccaaagcgagcac
attcgctacagcggttcacctatcccgctaagttttgatgaactgaacagcgagaaatcc
gtctgtctggtgagttttgcaccagacgcgccagcacaagtagaaatactgccgattccc
gtcactcagccgatgcagctgattaaaggcagcctgagtgatattgagcagcagctggct
gcctttcagaactatcagggggataagtccgtgtggctggatatcgaactcaacacgcag
gattatctgagcgacatgcaaaaacgcattcaggcgatgaccgaacatctgcccgttgag
gtactgctgctgcgccgtacgcgcgaacagcgcctgcaagcgattacgcggcaggacaag
gaaacgctgaacgaactgagcgtgcatgacgtttttgaacgtcgtatggcaacggagaca
gacatggaagacagtcgccaacagcgcgcccgtacgctgtttaatcaggttattgatgaa
ctggaaaatagcgagccagcccaatga
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