Pectobacterium actinidiae: M9782_08405
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Entry
M9782_08405 CDS
T08879
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00300
Lysine biosynthesis
pacb01100
Metabolic pathways
pacb01120
Microbial metabolism in diverse environments
pacb01230
Biosynthesis of amino acids
Module
pacb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M9782_08405 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pacb01002
]
M9782_08405 (dapE)
Enzymes [BR:
pacb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
M9782_08405 (dapE)
Peptidases and inhibitors [BR:
pacb01002
]
Metallo peptidases
Family M20
M9782_08405 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
WEF13277
LinkDB
All DBs
Position
complement(1933852..1934979)
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AA seq
375 aa
AA seq
DB search
MSCPVIELAQQLIKRPSLSPHDEGCQALMIERLTAIGFTVEAMDFGDTQNFWAWRGTGKT
LAFAGHTDVVPSGDESHWQHPPFEPIIRDGMLYGRGAADMKGSLAAMVIAAERFVAAHPN
HQGRLAFLITSDEEASAVNGTVKVVEALMARNERLDYCLVGEPSSTHVVGDVVKNGRRGS
ITANLHVHGVQGHVAYPHLADNPVHRAAPAINELIATEWDQGNAFFPPTTMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDVLIQQRVAELLDRHQLNYTIDWKLSGQPFLTARGEL
VDAVVNAVKHYNEVTPELLTNGGTSDGRFIARMGAQVVELGPVNATIHKVDECVSAADLQ
LLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttgcccagtcatagaactcgctcaacagttaattaaacgcccttccctcagcccg
catgacgagggttgccaggcgctcatgattgaacgcctgacggcgataggctttaccgtc
gaagcgatggattttggcgatacccagaatttctgggcatggcgcggcacggggaaaacg
ctggccttcgccggacacaccgatgtggttcccagcggtgatgaaagccactggcagcat
ccaccgtttgaacccatcattcgtgacggcatgctgtacggtcgcggcgcggcggacatg
aaaggttcactggctgcgatggtgattgccgccgagcgctttgtcgctgcccatcctaac
catcaagggcgtctggcgttcctgattacctcggacgaagaagccagcgccgttaacggc
accgtaaaagtggttgaggcgttgatggcacgcaacgagcggttggactactgtctggtc
ggcgagccgtccagtacgcatgtggtgggcgatgtggtaaaaaatggccgtcgcggctct
atcaccgcgaatctgcacgtacacggcgtgcaagggcacgttgcttatcctcatctggcg
gacaaccccgttcaccgtgcagctccagcaattaacgaactgatcgccaccgaatgggat
cagggcaacgccttcttcccgccaaccaccatgcaaatcgccaatattcaggcaggcact
ggcagcaataacgtcatccccggcgaactgtttgtccaatttaatttccgcttcagcact
gaattaaccgatgtgttaatccagcagcgcgtcgcagaattgctggatcgccatcagctt
aattacaccatcgactggaaactctccggccaaccattcctgaccgcacgtggcgaactg
gtcgatgcggtggtgaatgccgtcaaacattacaatgaggtcaccccagagctactgact
aatggcggcacctccgatggccgtttcattgcccgcatgggcgcgcaggtcgttgagctg
ggccccgtcaatgctacaatccataaagtggatgaatgcgttagcgcagcagatctgcaa
ctgctgagccgcatgtaccaacgcattatggagcagctcatcgcatga
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