Pectobacterium actinidiae: M9782_08705
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Entry
M9782_08705 CDS
T08879
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_08705 (phrB)
Enzymes [BR:
pacb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M9782_08705 (phrB)
DNA repair and recombination proteins [BR:
pacb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M9782_08705 (phrB)
Prokaryotic type
M9782_08705 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WEF13329
LinkDB
All DBs
Position
1995567..1997033
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AA seq
488 aa
AA seq
DB search
MTTYVVWLRNDLRVTDNLALYSACQDPNATVLAVFIATPAQWEKHDMAPRQAAFLLENLT
LVQHALAEKGIPLHYHECTDFAASVDWLVQFCAQQQATDLFYHYQYEINERLRDKQVKDR
LADSVICHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLESDTTCVPAPDARGEP
IDNTMELAPFSYPQREVDGEDFPRGERAALQQLRRFCREQVQDYDQQRDFPAKPGTSKLS
PYLALGIVSPRQCFNRLRAECPDMLERREGGAFTWFNELVWREFYRHLIVSWPQLCKHRP
FTAWTQWVKWRESPEDLAAWQQGKTGYPIVDAAMRQLNETGWMHNRLRMICASFLVKDLL
IDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPEGRFIR
HWLPELAAVPDKDIHQPHRWADKHHHQLNYPLPIVDHKTARQDTLAAFEAAKNIGMANND
QEEKSKYA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtatgtagtctggctacgcaacgacctgcgcgtgaccgataatctggcgctg
tactcggcctgtcaggatccgaacgccactgtgctggccgtctttatcgcgacacccgcg
cagtgggaaaagcacgacatggcaccgcgtcaggcggcttttttgctggaaaacctgacg
ctggtgcagcacgcgctggccgaaaaaggcatcccgctgcattaccacgaatgtactgac
tttgcggcatcggttgactggctggtgcagttttgtgcgcagcagcaggccaccgatctt
ttctatcattatcagtatgaaatcaacgagcgcctgcgtgataagcaggtgaaagatcgg
ctggcggatagcgtgatttgtcacggttatcatgacagcctgttgctgccgccgggtagc
gtgctgacgggtaatggcgagatgtataaagtgtttacgccttttcgtcaggcctttatc
aaacgcctgctggagtcggatacgacgtgcgtgccagcaccggatgcgcgcggtgagcca
atcgataacacgatggaactggcaccgttcagctatccgcagcgcgaagtggatggtgag
gattttcctcgcggcgaacgcgcggcattgcagcaactgcggcgcttttgtcgcgaacag
gtgcaggattacgaccagcagcgggattttccggcaaagcctggcaccagcaaactttct
ccgtatttggcgctggggatcgtatcgccgcgccaatgttttaaccgcctgcgtgccgaa
tgtccggatatgctggaacggcgtgagggcggagcattcacctggtttaatgaactggtc
tggcgtgagttttaccgtcacctgattgtgtcctggccgcagttgtgtaaacaccgaccg
ttcaccgcgtggacgcagtgggtgaaatggcgggaatcaccagaggatttagctgcctgg
caacaggggaaaaccggctacccgatcgtggatgcggcgatgcgtcaactgaatgaaacg
ggatggatgcacaatcgattacgtatgatttgcgccagttttctcgtcaaagatttactg
atcgattggcgtgaaggcgaacgctactttatgtcgcagctgctggatggcgatctggcg
gcgaataacggcggctggcagtgggcggcgtcgacaggcaccgacgcggcaccttatttt
cgtattttcaacccgacaacgcagggcgagcgcttcgacccggaaggtcggtttattcgt
cactggctgcccgaactggccgccgtgccggataaagatattcatcagccccatcgctgg
gctgacaaacaccaccatcaactgaattatccgctgccaatcgtcgaccataaaactgcg
cgtcaggatacgctggcggcgtttgaggcggcaaaaaatatcggtatggcgaataacgat
caagaagagaaaagtaagtatgcgtaa
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