Pectobacterium actinidiae: M9782_09145
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Entry
M9782_09145 CDS
T08879
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00523
Polyketide sugar unit biosynthesis
pacb01110
Biosynthesis of secondary metabolites
pacb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M9782_09145
Enzymes [BR:
pacb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
M9782_09145
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
RmlD_sub_bind
adh_short
KR
NmrA
Zn_ribbon_8
HypA
DUF6510
Zn_Ribbon_TF
zf-C2HC_3
Attacin_N
Motif
Other DBs
NCBI-ProteinID:
WEF13412
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All DBs
Position
2089575..2090705
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AA seq
376 aa
AA seq
DB search
MSNRNVLISGGAGFIGSNLSLALIDKGWNVTVLDNLSPQIHSDESPLYKSIEGKVNFIQG
DVRSKEDWRRALKGQDCVVHLAAETGTGQSMYQIQQYIDVNVGGTGILLDLLANEPHNVS
RLVVASSRAIYGEGRYSCENCGEVYPDSRHAAHMEESDFEVKCPKCAKNVTMMATHEESK
IHPSSIYGITKQTQEQLVLSAGQALNIPAVAFRYQNVYGPGQSLSNPYTGILSIFSTRIR
NNNDILIFEDGQESRDFVYIDDVVRATIAGIENPAAAGQVFNVGAGVSTDVTTVATTLVN
AYGSNVNVRTTGNFRVGDIRHNIADLTKIKEVLGFEPKVSFEEGIKAFTDWVLTQETQTD
SYEASIQEMKAKGLYK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgtaatgttctgatctctggtggcgcgggatttattggttccaacttatcg
cttgctttaatcgataaagggtggaatgtcactgtactggataacctgtctccacagatt
catagcgacgaatctccactttacaagagcattgaaggaaaagttaattttattcaaggt
gacgttcgttcaaaagaagattggagaagggcactcaaaggtcaagattgtgtcgtgcac
ttagccgccgaaacgggtactggccagtcaatgtatcaaattcagcaatacattgatgtc
aacgtaggggggacagggatcttgttggatctgctggctaatgaaccacataatgtgtcg
cggttggtcgttgcatcttctcgagctatttacggagaaggccgttattcttgtgagaat
tgtggcgaagtatatccagattctcgccatgcagcgcacatggaagaaagtgactttgaa
gttaaatgccctaaatgtgctaaaaatgtcaccatgatggctacgcatgaagaaagtaaa
atccacccttcttctatttatggtattaccaaacagacgcaggaacaattagttttgtcc
gcagggcaagccttaaatattccagcggttgcgtttcgttatcagaatgtatatggtcca
gggcaatcattgtctaatccctacactggcatcctatctattttctctacgcgtattcgt
aataacaacgatattcttatttttgaagatgggcaagaaagtcgtgattttgtctacatt
gacgacgtagttagagcgactatcgctggtattgagaaccctgcagctgcgggacaagtt
tttaatgttggtgcgggtgtatcaacggatgtcacaactgtagcaactacgctagttaat
gcatatggctctaatgttaatgtaagaacaacgggtaattttcgcgtaggtgacattcgc
cataatattgctgatttgacgaaaattaaagaagtcctcggtttcgaacctaaggttagc
tttgaagaaggtatcaaagcattcactgactgggtattgactcaagaaacgcagactgac
agttacgaagctagtatccaggaaatgaaagctaagggtctatataaatga
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