Pectobacterium actinidiae: M9782_10135
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Entry
M9782_10135 CDS
T08879
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M9782_10135 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_10135 (uvrB)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9782_10135 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M9782_10135 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
WEF13597
LinkDB
All DBs
Position
2376042..2378054
Genome browser
AA seq
670 aa
AA seq
DB search
MSKVFTLNSDFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MMLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGHVLQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELAERKKVLLANDKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRAAINERVLVTALTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLRGKAILYGDRITASMAKAIGETERRREKQEAYNTEHGIVPQGINKKISDILQLG
QPTNKGKGRGNRKAAEPATRYELMTPKALELKIRELESKMLTHAQNLEFEEAAALRDEVQ
ALRAQFIAVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtatttacactgaattccgactttaaaccggcaggcgatcagcctgaggcc
attcgtcgtttaaaagaaggtctggaagacgggttagcgcatcaaacgctgctcggggta
acgggctcaggtaagacgttcacgatcgccaatgtgattgccgacctcaatcggccgacg
atgatgctggcgccaaacaaaacgctcgcagcccagctgtacggcgaaatgaaagaattc
tttcccgataatgccgtcgagtacttcgtttcgtattacgactattatcagccagaggcc
tacgttcccagctcggacacctttattgaaaaagatgcgtcggttaacgaacatatcgaa
cagatgcgtctttccgcgacaaaagcgctgctggagcgacgcgatgtcatcgtcgtggcc
tcggtatccgcgatctacggtctgggcgatcccgatctctacctgaaaatgatgctgcac
ctgacgcaagggatgctgattgaccagcgtgcgattttgcggcgtttggccgagttgcag
tatgcccgtaacgatcaggcgtttcagcgcggtacgttccgtgtgcgcggtgaagtgatc
gatattttccctgcggaatctgacgaaatcgcgctgcgcgttgaattattcgatgaggaa
gtggaacggctgtcgctatttgacccgctgacgggccacgttctccaaacggtgccgcgc
tacaccatctatccaaaaacgcactacgtcacgccacgcgagcgtattttgcaagcgatg
gaagacattaaggttgaactggccgagcgtaaaaaggtgctgctggccaatgacaaactg
gtggaagagcagcggctgagtcaacgcacgcagtttgatctggagatgatgaacgaactg
ggttactgctctgggattgaaaactactctcgctacctttccggtcgtggccccggtgag
ccgccgccgacgctgtttgattatttgcctgcggacgggctgctggtcattgatgaatcc
cacgttaccgttccccagattggcggtatgtatcgtggtgaccgtgcgcgtaaagagacg
ctggtcgaatacggtttccggctgccttcagcgctggataaccgaccgatgaaatttgaa
gaatttgaagcgttagctccacagacgatctacgtatctgcgacgccgggtaactatgaa
ctggaaaaatcgggcggtgaagtgatcgatcaggtggtgcgccccactgggctgctcgat
ccgattattgaagtacggcctgttgcgacacaggtggacgatctgctttccgaaattcgt
ctgcgtgcggcgattaatgagcgggtactggtgaccgcgctgaccaaacgaatggcggaa
gatctgacggaatatctggaagaacacggcgagcgggtacgttatctgcactcggatatt
gataccgtcgaacgcgtggaaatcatccgtgatttacgtcttggcgagttcgacgtgttg
gttggcatcaacctgctgcgtgaagggctggatatgccagaagtgtcgctggtggcgatt
ctggatgccgataaagaggggttcctgcgttctgaacgttccctgatccagacgattggc
cgcgccgcgcgtaatctgcgcggtaaagccattctgtacggtgaccggattacggcatcg
atggcgaaagcgattggtgaaacggagcgccgtcgcgagaagcaggaagcctacaacacc
gagcacggcattgtgccgcagggcatcaataagaaaatttccgatatcctgcaactggga
cagccgacgaacaaaggcaaagggcgtggcaatcgtaaggcggcagaacccgcaacacgt
tatgaactcatgacgccgaaggcgctggagctgaaaattcgcgagctggaaagcaagatg
ttgacgcacgcgcagaaccttgaatttgaagaggctgctgctctgcgcgatgaggtacag
gcactgcgtgcacaatttatcgcggtatcctaa
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