Pectobacterium actinidiae: M9782_11190
Help
Entry
M9782_11190 CDS
T08879
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pacb03009
]
M9782_11190 (ycaO)
Ribosome biogenesis [BR:
pacb03009
]
Prokaryotic type
ribosomal protein modification factors
M9782_11190 (ycaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WEF09811
LinkDB
All DBs
Position
complement(2605078..2606841)
Genome browser
AA seq
587 aa
AA seq
DB search
MTQTFIPGKDAALEDSIARFQQQLQDLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKSIANGDFVHYPNEKWFPIPENDALPEG
ILDARLHQFYDPEQELSASDLIDLQSGNADRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERSIKNRIIAESISLPEIPQEVLNRYPGVVEAIATLEKE
GFPIFSYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKKQADYEFADWSFKGSTEEEFATLM
AIFKQEDKEVYIADYEHLAVYACRIIVPGMSDIYPADDLLLANNSMGAHLRDTLLALPDS
KWEKEDYLTLLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRVGELKAMLALAGSDLDQ
ALTWTEWTQDFNGSVFTAQRSNYYRCLQTLLLLAQEPERDPAEYYDAFTKMYGSETVDAA
SAAIAGEACFYGLFAVDDTFNSLPAHQSLLAAYEKLQQAKRRYWQAK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacaacagctccaggacctggggtttaacatcgaagaagcgtcatggctgaacccggtg
ccaaacgtctggtctgtccatattcgagaccgtgattgcccactctgcttcactaacggt
aaaggcgccagtaagaaagcggcactggcctctgcgttaggtgagtatttcgagcgtctg
tccaccaactatttctttgctgacttctatctcggcaaaagcatcgctaacggcgatttc
gtccattacccaaatgaaaaatggttccctattccagaaaatgatgcgctaccggaaggt
attctggatgcccgtctgcaccagttttacgatcctgagcaggaattgagcgctagcgat
ctgatcgatctgcaatccggcaatgctgacagaggcatttgcgcgctgccatttactcgt
cagtccgatcagcaaactgtctatattccgatgaacatcatcggtaacctgtacgtttct
aacgggatgtccgcaggtaacaccgccaacgaagcacgcgttcaggggctatctgaagtg
tttgagcgcagcatcaaaaaccgcatcatcgctgaatccatcagtctgccggaaattccg
caagaggtgttaaaccgttatccaggtgtggtcgaagcgattgcaacgctggaaaaagaa
ggtttcccgattttctcttacgatgcctcactgggcgggaaatatccggttatctgcgtg
gtgctgtttaaccccgcgaatggcacctgctttgcctcgttcggcgcgcaccctgatttc
ggcgtggcgctggagcgtaccgttaccgaactgctgcaaggccgtggattgaaagatctg
gacgtgttcaccccaccaacattcgatgatgaggaagttgccgagcacgctaatctggaa
acccactttatcgattccagcggcctgatctcctgggatatgttcaagaagcaagcggat
tatgaatttgcagattggagctttaaaggatcgacggaagaagaatttgctaccttgatg
gcgattttcaagcaggaagataaagaagtctacatagctgactatgagcatctggctgtt
tatgcctgccgcatcatcgtaccgggaatgtcggacatctaccctgctgacgatctgttg
ttagccaataacagcatgggcgctcatctgcgtgacacgctgctggcgctacctgacagc
aaatgggaaaaagaagactatctgactctgttgcaacagttggatgacgaagggctggat
gatttcactcgcgtacgtgagctgctgggtattgccactggcaaagataatggctggttc
acgctgcgcgttggcgaattgaaagcgatgctggctctggctggtagcgatctggatcag
gcgctgacctggacagagtggacacaagatttcaacggctccgtctttacggcacagcgc
agcaattattaccgttgcctgcaaactctattgttactggcgcaagagcctgagcgcgac
ccagcagaatattatgacgcctttaccaaaatgtacggcagcgagacggtcgatgccgcc
agcgctgccattgctggtgaagcgtgcttctatggtctgtttgccgtggatgacaccttt
aactctttacctgcgcaccagtcactgctggctgcctatgaaaaactgcaacaggcgaaa
cgtcgttattggcaggcaaaataa
DBGET
integrated database retrieval system
