Pectobacterium actinidiae: M9782_11645
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Entry
M9782_11645 CDS
T08879
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M9782_11645 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_11645 (ruvB)
Enzymes [BR:
pacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9782_11645 (ruvB)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9782_11645 (ruvB)
RecFOR pathway proteins
M9782_11645 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
TIP49
AAA_3
AAA_16
AAA_14
nSTAND3
Rad17
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
AAA_24
AAA_28
TsaE
NB-ARC
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WEF09887
LinkDB
All DBs
Position
2709454..2710458
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISADAVPEEEFLDRAMRPKLLSEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVADLQYIVGRSAQCLGLDLTSDGALEVARRSRGTPRIANRLLRRVRDFSEVKSEG
AITGTVATQALDMLAVDTEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttgatttctgctgacgccgttcccgaagaagagtttcttgac
cgtgcgatgagaccgaagctgctgagcgaatatgtagggcagccacaggtacgtgagcag
atggagatttttattcaggccgcccgtaaacgtggggatgcgctggatcacctgcttatt
tttggtcctcccggtctgggtaaaacgacgctggcgaatattgttgctaacgagatgggc
gtgaatatgcgcacgacgtcggggccggtgctggaaaaagccggcgacctcgcggcattg
ctaaccaatctcgaaccgcatgatgtgctgttcatcgatgaaattcatcgtctgtcgccc
gttgtggaagaagtgctgtatccggcgatggaagattatcagttggatatcatgatcggt
gaagggcctgctgcccgttcgatcaaactcgatttgcccccttttacgctgattggtgca
acgacgcgagcaggttcgttaacctcaccgttgcgcgatcgttttggcatcgtgcagcgt
ctggaattttataatgtcgccgatttgcagtatatcgttggccgcagtgcacagtgtctg
gggctggatctgacgtctgatggtgcacttgaagtggcgcgtcgctcgcgggggacacca
cgtattgccaaccgattattacggcgggtacgtgatttctccgaagtgaagtcagaaggg
gcgattactggtactgtggcgacgcaggcgctggatatgctggcggtggataccgaaggt
tttgactacatggaccgtaagctgctgttggccattatcgataaattcatgggcggcccg
gttggtctggacaatttagccgctgcgattggcgaagagcgcgaaacgattgaagacgtg
ctggagccgtttctgattcagcaagggttcattcagcgtacgccgcgcggtcgcatggcg
acgcagcatgcctatcggcactttggcttaacgcgagaagagtag
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