Pectobacterium actinidiae: M9782_13285
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Entry
M9782_13285 CDS
T08879
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00040
Pentose and glucuronate interconversions
pacb01100
Metabolic pathways
pacb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M9782_13285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9782_13285
Enzymes [BR:
pacb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
M9782_13285
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
WEF10191
LinkDB
All DBs
Position
3070713..3072419
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASAATPDRLTIVNQYVDNVLTKAGDRYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRHAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAMVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHV
YDWKIMETSRHGKYGQKIGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKREETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVIKPYPADNSFLLSYARAYTVLPDAELWRVA
RGIAHAQGLGELGSAPGKDTKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNI
ISTRYQNGFFMEDSKRQYADIDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRME
DGSTRVSTRDNEIFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgcgctgtcgctccttgcaggtctggtcgctttacaggccagcgccgct
acgcctgaccgcctcaccatcgtcaatcaatatgttgataacgtgctgacaaaagccggc
gatcgctatcatggtcagtcgcctacgccattacttgctgatggtgtcgatcctcgcacg
ggcaaacaaatggagtggatcttccccgatggtcgccacgccgtgttatccaacttttcc
gcacagcagaacctgatgcgcgtgctggtcgggctcagtaatctgagcgggaaccccagc
tacaagcaacgtgccgaagcgatggtgaagtatcacttccaacattatcaggatgagagc
ggcctgctgatttggggcggccaccgttttgtggatctaaaaacgctgcaaccggaaggc
cccagcgaaaaagagatggtgcatgagctgaaaaatgcctatccctactacgatttgatg
ttcagcgtcgataaagacgcaaccgcacgctttattcgcggtttctggaatgcacacgtt
tatgactggaagatcatggaaaccagtcgccatggtaaatacgggcaaaaaataggtgcg
ctctggcaaagtccgtttgagcaacagccgcccttcttcgccaccaaaggcctcagcttt
ctgaatgcagggaacgatctaatctattccgcatcactgctgtacaaatacaataaagaa
gacggtgcgctggtttgggcgaaacgtctggcacagcagtacgtgctgccacgggataaa
gcgaccgggctcggcgtgtatcagtttacgcaggcgctgaagcgtgaggaaaccaccgac
gatgccgatacgcattccaaatacggcgatcgcgcccagcgccagtttggcccagagttc
ggccccaccgcgctggaaggcaatatgatgctgaaaggacgcaccagcacaatctattct
gaaaatgcgctcatgcagcttcagttgggtaaagatttaggtgcggagggcaaagaactg
ctgacgtggacaaccgatggcctgaaagcctttgccaaatacgcctacaacgagtcggat
aacacattccgcccaatgctggctaacggcaaagatctctccaactacgttctgccacgt
gacggttactacggcaaaaaaggcaccgtgatcaagccttatcctgcggataattcattc
ctgctttcctatgctcgcgcctataccgtgttaccagatgccgaactgtggcgtgtcgca
cgcggcatcgctcatgctcagggactgggtgagttaggttcagcgccgggtaaagacacc
aaagtagatctcgcgactaagaacaatgatccttacgccctgttcgcgctgctggatctg
tatcaggcgagcaaagtgaaagactatctgtcgctggcggaaaaagtgggcgataacatt
atcagcacacgctaccaaaacggcttctttatggaggattccaagcgacagtatgccgat
atcgacaccatcgagccttatgccctgttagcgctggaagctgcggtgcgcaatcagcca
cagtccgttgcgccgttcctgaatggtgcgggcttcactgaaggcggctaccgtatggaa
gatgggtcaactcgcgtgtctactcgcgataatgagatcttcctgctgaacgttggcgaa
accttaaaacccaacaacaagaagtaa
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