Pectobacterium actinidiae: M9782_13550
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Entry
M9782_13550 CDS
T08879
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9782_13550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pacb02000
]
M9782_13550
Transporters [BR:
pacb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
M9782_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WEF10242
LinkDB
All DBs
Position
complement(3127979..3129058)
Genome browser
AA seq
359 aa
AA seq
DB search
MSRLNTLSKAKGLFKRQTLKKIAATAFLVTMACQAQAESVTVISFGGLNKDAQDKAFYKP
FAAAGKGTVEAGEYNGEMARIRAMVETGQVGWDVVEVEGPELMRGCSEGLFEPLDWSKLG
DQSQFVKGAVSECGAGIFLWSTVLTYNAQKLKQAPKSWADFWNVKDYPGKRALRKSAKFT
LEIALLADGVKRDDLYTVLATPEGVERAFKKLDQIKSNIQWWESGAQPLQWLVSGDVVMT
SAYNGRVAAAQKEGHDFKIVWADSIYDLDSWAIVKGSKHKALAEQFIAFANQPENQKVFA
ENIPYGPTHVKTTSLLAPAIAANLPTAPDNLAQALQVDTEFWIDHGEELEQRFNAWAAQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacttaatactctctccaaagcaaaaggactgttcaaacgtcagacgctgaaa
aaaatcgcggctaccgcttttctggtgacgatggcctgtcaggcccaggcggaatccgtc
acggtgatctcattcggcgggttgaacaaagatgcgcaggataaggcgttttacaaaccg
ttcgccgcagcgggcaaaggtacggtagaagctggcgagtataacggtgaaatggcgcgt
atccgggcgatggtggaaaccggacaggtaggctgggatgtcgtggaagtcgaaggccct
gaactgatgcgcggctgtagcgaagggctgtttgaaccgctggattggtcaaaactgggt
gatcaatctcagtttgtcaaaggcgcggtgagcgagtgcggtgcggggatcttcctgtgg
tctaccgtactgacctataacgcacagaagctgaaacaggcaccgaaaagctgggcagat
ttctggaatgtgaaagattaccccggcaaacgtgcgctgcgtaaaagtgccaaattcacg
ttagaaatcgcgctgctggccgatggcgtgaaacgtgacgatctctacacggtgttggcg
acgccagaaggtgtcgagcgcgcctttaagaaattggatcagatcaaatcgaatatccag
tggtgggaatccggtgcacagccgctgcaatggctggtgtcgggggatgtggtgatgacg
tctgcctataacggccgcgtcgcggcggcgcagaaagaagggcatgacttcaagattgtc
tgggctgacagtatttacgatctggacagctgggcaatcgtcaaaggctccaagcacaag
gcgctggcggaacagttcattgcgtttgccaaccagccggaaaaccagaaggtgtttgcc
gagaacatcccgtatggcccgacgcacgtcaaaaccaccagcctgctggcaccggccatc
gccgctaatcttccgactgcaccggataatctggcacaggccttgcaggttgatacggag
ttttggatcgatcacggtgaagagctggaacagcgctttaatgcctgggctgctcagtaa
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integrated database retrieval system
