Pectobacterium actinidiae: M9782_16220
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Entry
M9782_16220 CDS
T08879
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00260
Glycine, serine and threonine metabolism
pacb00270
Cysteine and methionine metabolism
pacb00450
Selenocompound metabolism
pacb00670
One carbon pool by folate
pacb01100
Metabolic pathways
pacb01110
Biosynthesis of secondary metabolites
pacb01230
Biosynthesis of amino acids
Module
pacb_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M9782_16220
00270 Cysteine and methionine metabolism
M9782_16220
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
M9782_16220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
M9782_16220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pacb04147
]
M9782_16220
Enzymes [BR:
pacb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
M9782_16220
Exosome [BR:
pacb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
M9782_16220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WEF10734
LinkDB
All DBs
Position
3705973..3707133
Genome browser
AA seq
386 aa
AA seq
DB search
MPQFDTQTVHAGYTPDSTGAVMPAIYATSTFAQPAPGEHTGYEYSRSGNPTRAVLEAAIA
ELEGGTRGFAFASGLAASSTLLELLDQGSHIVAVDDLYGGTWRLLENVRKRTAGLQVTYV
DPADLTALEHAITPQTKMIWVETPTNPLLKLADLAAIATLAKKHRLISVADNTFASPAIQ
RPLDVGFDIVVHSATKYLNGHSDVIAGLAVVGKNSELASQLAYLQNAIGGVLDPFSSFLT
LRGIRTLALRIERHNQSALQLAHWLELQPQVEQVYYPGLPRHPQHGLAQQQMRGFGGMIS
VRLKGDEDYAREVIKRTRLFTLAESLGGVESLISQPYSMTHASVPLEKRRQKGITPQLLR
LSVGIENVQDLIDDLYQALNASNISE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattcgatacccaaaccgttcacgcgggctataccccggacagcactggcgca
gtcatgcccgcgatttatgcaacctccacgtttgcccaacccgcacccggtgagcatacc
ggctacgaatattcacgcagcggcaacccgacgcgtgcggtgctggaagcggcgattgcc
gaactggaaggtgggacgcgaggcttcgcttttgcctctggtctggccgccagttccaca
ttgctggaactgctcgatcagggtagccatatcgtggccgtggacgatctctacggcggc
acctggcgtctgttagaaaatgtccgcaaacgcaccgccggattgcaagtgacctacgtt
gaccccgccgatctcaccgcgctcgaacacgccattacgccgcagacaaaaatgatctgg
gttgaaacgccaaccaatccgctgctgaaactggccgatttggcggccatcgctacgtta
gccaaaaaacatcggctcatcagcgtggcggataacacctttgcttcaccggctattcag
cgtccgctggatgtggggtttgatatcgtggtgcactccgcaaccaaatacctcaacggt
cattcagacgtgattgccgggctggcagtcgtcggcaagaacagtgaactggcgtcacag
ttggcctatctgcaaaatgcgattggcggcgtactcgaccccttcagcagcttcctgacg
ctgcgcggcatccgcacgctggcgctgcgaattgaacgccacaatcagagcgcccttcag
ctcgcacactggctggaactccagccgcaggtggagcaggtttactatccggggctaccg
cgccacccgcagcacgggttggcacagcagcagatgcgcggctttggcggcatgatctct
gtgaggttgaagggcgatgaggactatgcgcgtgaggttattaagcgcacgcgattattt
acgctggcagagagtctgggcggcgtggaaagcctgattagccagccctactccatgacc
cacgcttccgtgccgttggaaaaaagacgacaaaaagggatcacgccacagctgctgcgt
ttatccgtggggattgaaaatgtgcaggacttaatcgacgacctgtatcaggcactgaat
gcgagcaatataagtgaatga
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