Pectobacterium actinidiae: M9782_17570
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Entry
M9782_17570 CDS
T08879
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
M9782_17570 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacb03400
]
M9782_17570 (xseA)
Enzymes [BR:
pacb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
M9782_17570 (xseA)
DNA repair and recombination proteins [BR:
pacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
M9782_17570 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6594
Motif
Other DBs
NCBI-ProteinID:
WEF10984
LinkDB
All DBs
Position
4001415..4002809
Genome browser
AA seq
464 aa
AA seq
DB search
MSQFPSSAIFTVSRLNQTVRQLLEMEMGQIWLSGEISNLSQPSSGHWYFTLKDERAQVRC
AMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKQR
LAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPTSVQGAE
APLQIVRAIELANQRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLSQRNREFTRLH
HRLQQQHPQLRLARQQAQLVKLRQRLDDAMQQQLRQTSRRSERLQQRLMQQQPQTRIHRA
QQRLQQLSYQMQSAVERQLNQSKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNV
AQITPGETLKTRLQDGWVESQVTTLMTNSNSAKKRQKTASKTQK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatttccctcctctgcaatttttaccgttagccgcctgaatcagacggttaga
caactgttggaaatggaaatgggccagatttggctctccggcgaaatctccaacctttct
cagccctcatccggccattggtatttcacgctgaaagacgaacgtgcacaggtgcgctgc
gcgatgtttcgtaccagcaaccgtaaagtgacgttccgcccacaaaacggtcagcaggtg
ctgattcgggcgagcattacgctgtatgaaccccgtggcgactatcagctactggcggaa
agtatgcagcccgcaggtgatggcctgctacagcagcagtttgaacagctcaagcaacgt
ctcgccgccgaagggctgttcgaccaacaatttaagcaagtgcttccctctcctgccaaa
caggtcggtgtgattacatcagccagcggtgccgccctacacgatatcttgcaggtgtta
cagcgccgcgatccgtcactgccggtgatcgtgtatcccacgtcagtgcaaggcgcagaa
gcaccgttacaaattgtccgcgccatcgagttggctaaccagcgagatgagtgtgatgtg
ttaatcgtcgggcgcggcggcggttcgctggaagatctctggagttttaatgacgaacgg
gtcgcccgcgcgattttcgccagccgcattcctatcgtcagcgctgtgggtcatgaaacc
gatgtcaccatcgccgatttcgtcggtgacctgcgtgcgcccacgccatccgccgctgcc
gagttagtgagtcgtaaccaactggagctgttacgccaaatacagtcccagcgtcagcgg
ctggaaatggcgatggattactacctttcccagcgcaaccgggaattcacccgcctgcac
caccgcttgcaacagcaacatccacagctgcggctggcacgtcagcaggcccagttggtc
aaattacgccaacggctggatgatgccatgcagcagcagcttcggcagacatcacgccgg
agtgaacgcttacaacagcgtctgatgcagcagcagccgcaaacccgtattcatcgtgcc
cagcagcgtttgcaacagcttagctatcagatgcaaagtgcggtggaacgtcagttgaat
cagagcaagcagaagctaggcatcgcctgttcgcgactggaaggcgttagcccgctcgca
acgctggcgcgcggctataatgtcaccaccgcaccagacggcaaggtgctgaaaaacgtc
gcacaaatcacacccggtgaaacactgaaaacccgtttgcaggacggctgggtagaaagt
caggtcacgacgctgatgacgaattcaaattccgcgaaaaagcggcaaaaaaccgcatct
aagacgcaaaaataa
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