KEGG   Pectobacterium actinidiae: M9782_18230
Entry
M9782_18230       CDS       T08879                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pacb  Pectobacterium actinidiae
Pathway
pacb00230  Purine metabolism
pacb00240  Pyrimidine metabolism
pacb01100  Metabolic pathways
pacb01232  Nucleotide metabolism
Module
pacb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pacb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pacb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    M9782_18230 (nrdE)
   00240 Pyrimidine metabolism
    M9782_18230 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pacb03400]
    M9782_18230 (nrdE)
Enzymes [BR:pacb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     M9782_18230 (nrdE)
DNA repair and recombination proteins [BR:pacb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    M9782_18230 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN RNR-II_ins_dom
Other DBs
NCBI-ProteinID: WEF13849
LinkDB
Position
4153222..4155303
AA seq 693 aa
MLNLYDAEGNIQFEMDKLAARRYFLQHVNQNTVFFHNLEEKLRYLVEEGYYEADVLDQYQ
FDFIKSLFQQAYAHKFRFQTFLGAFKYYTGYTLKTFDGKRYLERYEDRICLVALTLAKGD
TALASALVDEIISGRFQPATPTFLNCGKKQRGELVSCFLLRIEDNMESIGRAINSALQLS
KRGGGVAFMLSNIRETGAPIKRIENQSSGIIPIMKMLEDAFSYANQLGARQGAGAVYLNA
HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKNNQVMYLFSPYDVEQVYGVP
LSEISVTEKYHEMVNDKRIRKSQIKAREFFQILAEIQFESGYPYMMFEDTVNRANPIHGR
INMSNLCSEILQVNEASLYDDDLGYSHIGKDISCNLGSMNIANAMASPDFGQTVEMAIRA
LTAVSDMSHISSVPSIEKGNDQSHAIGLGQMNLHGYLAKERIFYGTEEAVDFTNIYFYTV
AFHAIRASNALAIERNQRFSGFELSKYATGEYFDKYIEQRWEPTTARARELFEQAGIHIP
TQQDWAALRESVIAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSRIEIRKEGKIGRVY
YPAPYMNNDNLEYYQDAYEIGPQKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINKAQI
YAWTKGIKTIYYIRIRQMALEGTEVQGCVSCAL
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgctcaacctctacgacgcagaggggaatatccagttcgagatggataaactcgcggca
cgccgttatttcctacagcatgtaaaccagaacaccgtgttcttccacaatctggaagaa
aagctgcgttatctggtggaagaaggctactacgaagcggacgtgctggatcaatatcag
ttcgatttcatcaaaagccttttccagcaggcttacgctcacaagttccgctttcaaacc
tttctgggtgcgttcaaatactacacgggctatacgttgaaaacctttgacggcaaacgc
tatctggagcgctacgaagatcgcatctgccttgtggcgttgactctcgccaaaggggat
accgcactcgccagcgcgctggttgatgagatcatcagtggacgcttccagcccgccacc
cccacgttcctcaactgtggtaaaaagcagcgcggcgagctggtctcctgcttcctgctg
cgcattgaagataatatggaatcgattggtcgcgcgattaactccgcacttcagctctca
aaacgcggcggcggcgtagccttcatgctcagcaacatccgcgagaccggcgcgccgatc
aaacgtatcgaaaaccagtcgtctggcatcatcccgatcatgaaaatgctggaagatgcc
ttctcctacgccaaccagcttggtgcgcgtcagggcgcgggggcggtgtacctcaacgcg
catcacccggatattctgcgttttctggataccaaacgggaaaatgccgatgagaaaatc
cgcatcaagacgctgtctttaggtgtggtcatccccgatatcacgttccagttggcgaag
aataatcaggtgatgtacctgttctcaccctatgatgtcgagcaggtttatggcgtgccg
ctgtcggaaattagcgtgaccgaaaagtaccacgagatggtcaacgacaaacgcatccgt
aaatcccaaattaaagcacgcgaattcttccaaatcctcgctgaaatccagttcgaatca
ggctatccctacatgatgtttgaggatacggtgaatcgcgcgaacccgattcacggccgc
atcaatatgagtaacctgtgctctgagattttgcaggtcaacgaggccagcctgtacgac
gacgatcttggctacagccatattggtaaagacatctcctgtaacctcggttcgatgaat
atcgccaacgcgatggcttcacccgatttcggtcagacggttgaaatggcaatccgcgcg
ctgaccgccgtttccgatatgagccatatcagctccgtgccatccatcgaaaagggcaat
gaccaatcgcatgcgattggtttaggtcagatgaacctgcacggctatctggcgaaagag
cgtattttttacggtacagaagaagccgttgatttcaccaatatctatttttacaccgtc
gccttccacgcaattcgggcatcgaatgcgttagcaatagagcggaaccagcgtttttca
ggcttcgaactctccaaatacgccacgggcgagtattttgataaatacattgagcagcgc
tgggaacccacaacggcacgcgcacgtgagctgtttgaacaggcaggcatccacattccc
acccagcaagactgggcggcactgcgcgaatccgtgattgcgcacggcatttacaaccag
aacctgcaagcagttccgccgaccggttcgatttcgtatatcaaccactcgacatccagc
attcacccgattgtgtcacgtatcgagattcgtaaagagggcaagattggtcgcgtctac
taccccgccccttacatgaacaatgacaatttggagtattaccaggatgcctatgaaatc
gggccacagaagattatcgacacctatgccgccgcaacgcagcacgtcgatcaggggctg
tcgctaacgctgtttttccgcgataccgccaccacgcgcgacatcaataaagcgcagatc
tacgcctggaccaaaggcattaagactatttattacattcgcatacggcagatggcgctg
gaaggcaccgaagttcagggctgtgtgtcctgtgctctctaa

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