Pectobacterium actinidiae: M9782_18645
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Entry
M9782_18645 CDS
T08879
Name
(GenBank) DUF6531 domain-containing protein
Organism
pacb
Pectobacterium actinidiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
OCRE
DUF4112
Motif
Other DBs
NCBI-ProteinID:
WEF11166
LinkDB
All DBs
Position
complement(4224844..4230000)
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AA seq
1718 aa
AA seq
DB search
MSQNKQATLLSSEEAASRGFSTDKKISGGCAKCGYEVLIYYHYDSGEPVPNAPFVLIDSN
KTEIHGQTDANGLCFIYDMGGGTFELMLEEGEDEFTPQETIQNNPVLQSTPGYAALAGEY
FTLFLLLRKQGLVTYDADDSSDRHIDVDGAGIFTSIPDEYTKAYRRFWELDKKINRGNRQ
LKQAINKIHHSLAAETADAGGDDNAALMMFCEIILGCIPVVGQALDVYSIGEWCWQTHED
PKLMDDPLHVAGGVLCVIGVIPGLGDAIKVSGRAIIKALRNASSPAAVQFAIKTIRSLSN
GNLVKGVTELRGLLKEYGKKGKAMLLTMQQALVTAMKASEKDGWIVALMKDRFSKMLDYL
DQLVKRYDEAIATLEKEFDKFIPLIVTRVSGSPRPKGSFAKKADASPSHTTAESRAASPS
SGSKSEPTDSPTATKQSDAKPDGDKGKDQRLKKQTPEENVPHKAEPSKPTDAVEEKPKPQ
EPVKKKSESPPEEANSINAGRNTEKPSGKKGAEQDANNQNGTNKADSKDSKQNGDPVDMA
TGAVVEKRTDIQLTGMLPLPLQRYYRSTGKRHPGLLGTLWRTNWDISLTLNNGVATLTDG
EFNQAFFTLPGEGEVSRSSSNPQWRLTRQHGELVLHHVDGLCYRFEHALGLQLCLTSIDD
TAGNRVTFEWMLGELCWVVLPDRRLIHVTTEHRRITTLTLCTPQRQPLKTLVSYTYDRRG
HLLSVRADEGRNFDYRYSPEGWLLRWSDLGSTWVEHDYDQKGRAIRDRTSEGYWPGHFEY
DDDTLTSHYHSGFGGVFSYVRDERNNILLQRTPDGGETRFEWVDNQLVAETDPLGGRTVY
QRNDWGQVTDVTLPDGAMHHYAYDDNGQLLAYTDPLGNEWQYQRNAAGQVVEVNDPEGRE
WLYRYGETGQLSTVIGPDGVLQRYHYNRRGLLSSLERDNAPAVMFRYDDLDRLTERHIGH
EAGVQVRRWEYDGVRESPSKVVYEDGSETRFGYDVEGNLTAVTDALGQRYQFRYGAFDNL
LEATDPLGATVRYHYNAEAEFAGVTNSQGRDWTYGFDSSGRLSEERHYDGRVYRYQYDVA
DRLVQRSAPDGSALHYEHDAAGRITRITARKADGETDGITELAYDVAGRLTKAASPDAVV
EYTYNRAGQVTSETVNGEAVQSGYDAGGQRAVVEGILAPLQLAWQSGRLSSLGIGSHQPL
QFSHTAAGEEQRRTNGSGFSLRHEWSPTGLLQRQALEGADGRVNDVLERRYQYDVLDRLT
GISDSHWGEQAFRLNGAGQVTAERRDEGRRRQARLFGYDSEQNLCEVSQIAPGLGETLKV
QDAVVQSSARYDVAGRVIERGHTQYRYDDCGRLAMKRETRPGFRPKETYFDWDVQDRLVR
VSLPDGARWRYRYDAFGRRINKVREGQVPSAQAVARVAYRWDGDQLIGQQQYYADGSAAR
EVQWVYEPGSFRPLAQVEAQGDSTQLHYIVTDLTGTARELCSEEGEVRWRGEQGLWGAHR
EERRPIPLRRYLGDAANEEVYCELRYQGQLFDAETGLYYNRHRYYDAESGQYLSPDPIGL
DGGIRPQSYVHNPLEWVDPLGLAGCPEQRQRVLDNIEASRRARESSNIGGASPTPGSRTN
EGFMKDHVSPDSETTLHTKSPGFNTGKKNKDGQFKRYGLDSHGGISPHVHQPTRNISPKD
GTIYGGQGTKTKNGEVASPSNKDIKQLYDHVYNGKYNP
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaacaaacaggcaacgttgctttccagcgaggaagccgcgagtcggggtttt
agcacggataaaaaaatatcaggaggctgtgccaagtgtggctatgaagttctgatttat
taccattacgactctggtgagccggttcccaatgcgccatttgtcctcatcgacagcaat
aaaacagaaatccacgggcagacggatgccaatgggctctgttttatttatgacatgggg
ggcggcacgtttgagttgatgcttgaggaaggtgaagatgagtttacgccgcaggaaacc
atccaaaataaccccgtattacagtcaactccaggttatgccgcactagcgggcgagtat
ttcacgctgttccttctcctgcgtaaacaagggctagtgacctatgacgctgatgacagc
agtgaccgacatattgatgttgatggtgcgggaatattcacatcaatccccgatgaatac
acaaaagcttatcgtcgcttctgggaactggacaaaaagattaaccgcggtaatcgccaa
ctgaagcaggccatcaacaagatccaccatagcctcgcggcagaaacggcggatgcgggt
ggggatgataacgccgcgctcatgatgttctgcgagattattctgggttgtattcccgtc
gtggggcaagcgctggacgtgtactccattggtgagtggtgctggcaaacccatgaagat
cctaaactgatggacgatccactgcatgtagccggtggtgtcctgtgtgtgattggggtc
attcctgggctgggtgacgccattaaggtgagcgggcgggcgattattaaagcgctgaga
aatgcctcctcgcctgcggctgtgcagtttgccatcaaaacgatccgcagcttgtctaac
ggcaacttggtgaaaggcgttaccgaactgcgtggtttgctgaaagaatatggaaagaaa
ggcaaagcgatgctgttgaccatgcagcaggctttggtgacggcaatgaaggcctcggag
aaggatggctggattgttgcgctgatgaaagatcggttcagcaagatgctcgactatctg
gatcagttagttaaacgttacgacgaggctattgcgacccttgagaaagaatttgataag
tttattcctctgattgtgacacgggtttccggcagcccacggcctaaaggttccttcgcg
aaaaaggccgatgcctcgccaagccatacgacggcggaaagcagggcggccagtccatct
tcgggttcaaaatctgagcctactgattcgccaaccgccactaaacaaagcgatgctaaa
cctgatggtgacaagggaaaagaccagcggcttaaaaaacaaactccagaagaaaatgtg
ccacacaaggctgaaccgtcaaaacccactgatgccgttgaagaaaagcccaaaccgcaa
gagcccgtaaagaaaaaaagcgaatcccctccggaagaggcgaacagcattaatgcgggt
agaaatactgaaaagccatcgggtaaaaagggggctgagcaggatgcgaataatcagaat
ggtactaacaaggctgatagcaaagatagcaagcaaaatggcgacccggtcgatatggca
accggtgcggtggtggagaaacgtactgatattcagctaacgggaatgttgccgctgcca
ctgcaacgctactatcgctccacaggaaaacgccatcctggcttactgggaacgctatgg
cgcactaactgggatatcagcctaacgctcaacaacggggtggcaacgctaacggatggt
gaattcaatcaggcattcttcacccttcctggtgaaggagaggtcagccgctcatcgtca
aatcctcaatggcggttgacccggcagcacggtgaactcgttcttcatcatgttgatggc
ctgtgctatcggtttgagcatgcgctcggtcttcagctttgcctgacgtcgattgacgat
acggccggcaatcgggtgacgttcgagtggatgctgggtgaactgtgctgggtggtacta
ccggacaggcgcttgattcacgtcaccactgaacaccgcaggattacgacactgacgctg
tgtaccccgcagcgccagcctttaaaaacactggtcagctatacctacgatcgtcgcgga
catttactgagcgtgcgggcggatgaggggcgtaactttgactatcgctattcaccggaa
ggctggctgctgcgctggtcggatttaggttcgacctgggttgagcatgactacgatcaa
aaaggtcgcgctatccgtgacagaacgtcggaaggctactggccgggtcactttgaatac
gacgatgacaccctgactagccattatcacagcggatttggcggggtattcagctacgta
cgagatgaacgcaataatatcctgctccagcgcacgcctgacgggggagaaacccggttc
gaatgggtggataaccaactggtggcggagaccgacccgctgggtggtcgcacggtctat
cagcgtaatgactggggacaggtgaccgacgttaccctgcctgacggtgcgatgcatcac
tatgcgtatgacgataacgggcagttgctggcttataccgatccgctgggcaacgaatgg
caatatcagcgcaatgcagccgggcaggttgttgaggtgaacgacccggaaggacgtgag
tggctgtatcgttacggtgaaacagggcaactgtcgacggtgataggcccggatggcgtg
ttgcagcgttatcactataaccgtcgtggcctgctgagcagccttgagcgggataatgcg
ccagcggtgatgttccgctatgacgaccttgaccgcctgacggagcggcatatcggacat
gaagcgggcgtgcaggtgcggcgctgggagtatgacggcgtgcgcgagtctccgtcgaaa
gtggtgtacgaagacggcagcgagacgcggtttggttacgatgtggaaggtaacctaacg
gcggtgacggatgcgctggggcagcgctaccagttccgctatggggcgttcgataacctg
ctggaagcgacggacccgctgggggcgacggtgcgctaccactacaatgcggaagccgag
ttcgccggggtgacgaacagtcagggacgggactggacgtacggttttgacagtagcgga
cggttgagtgaagagcggcattacgacggtcgggtgtaccggtatcagtacgatgtagcg
gatcgtctggtgcagcgcagcgcgccggatggcagcgcattgcactatgagcacgatgcg
gcagggcggataacacgaatcacggcacgcaaggccgacggggaaacggacggcatcacg
gaactggcgtatgacgtagccggtcggttgaccaaagcggccagcccggatgcggtggtg
gaatacacctataaccgtgcagggcaggtgacatcggaaacggtgaacggcgaggcggta
cagagcggttatgatgcgggtggtcagcgtgcggtagtggaagggatactggcaccgctg
caactggcgtggcagtcgggtcggctgtcgtcgctgggtatcggttcgcaccagccgttg
cagttcagccacacggcggcgggagaagagcagcgacgaactaacggcagcgggttttca
ctgcgtcatgaatggagcccgacgggattgttacagcgtcaggcgctggaaggggcggac
ggccgggtgaatgacgtgctggagcgccgctaccagtacgatgtgctggatcgtctgacg
ggcatcagcgacagtcactggggcgagcaggcattccggctgaacggagccggtcaggtg
acggcagagcgccgcgatgagggacggcggcgtcaggcacggctgtttggctacgacagc
gaacagaacttgtgcgaggtgtcgcagatagcgccgggtctgggtgagacgctgaaagtg
caggatgcggtggtgcagtcgtcggcgcggtacgatgtagcaggccgggtcatcgagcgg
gggcatacgcagtaccggtatgacgactgcgggcgtctggcgatgaagcgggaaacgcgg
ccggggttcaggccgaaggagacgtatttcgactgggacgtgcaggaccgtctggttcgg
gtgagtttgccggacggggcgcgctggcggtatcgttacgatgcgtttggtcgcagaatt
aacaaggtgcgcgagggacaagttccgtcggcgcaggcggtagcgcgggtggcgtaccgg
tgggacggtgaccagctgattggtcagcagcagtactatgccgatggcagtgcggcaagg
gaagtgcagtgggtgtacgaaccggggagcttccggccgttagcgcaggtagaggcgcag
ggcgacagcacgcaactgcactacatcgtgacggacctgacggggacggcgagagagctg
tgcagcgaggaaggggaagttcgctggcgcggcgagcagggactgtggggcgcccaccgc
gaagagcggcgtcctattccgctgcggcgctatctgggggatgcggcgaacgaggaagtg
tactgcgagctgcgctatcagggacaattattcgacgcagaaacggggctttactacaac
cggcatcgttactatgatgcggagagtggacagtatctgtcgccggacccgatagggctg
gatgggggaataaggccacaatcatacgtacacaatccgctggaatgggttgatccgctg
ggcttggctgggtgtcctgaacagcgtcagagggtgcttgataatattgaggcaagccgg
agagccagagagtcgtcaaacattggaggagcctcacctacaccgggaagtcgaacaaat
gaaggcttcatgaaagatcacgtatctccagactctgaaacgacattgcataccaagtct
cccggttttaatactggtaagaaaaataaagatgggcagtttaagcgttacggattagat
tcccatgggggaattagcccacatgttcatcagccaacgagaaatatatcgccaaaagat
ggaacaatatatggtggacaaggaactaaaactaaaaatggtgaagtagcctctccgagc
aataaagatattaaacagttatatgatcatgtttataacgggaaatataacccatga
DBGET
integrated database retrieval system
