KEGG   Pectobacterium actinidiae: M9782_18750
Entry
M9782_18750       CDS       T08879                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pacb  Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:pacb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pacb02044]
    M9782_18750 (tssC)
Secretion system [BR:pacb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   M9782_18750 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WEF11186
LinkDB
Position
complement(4257129..4258607)
AA seq 492 aa
MSIIEEQVQAGAASASGSLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPV
NKALVDSMIVELDKKLSKQIDVILHAKELQELESSWRSMKLLVDRTDFRENIKLLVLHAT
KEELLDDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVIGDYALTQSSPDIKLMQYVSA
VGAMAHAPFISSVAPTFFGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIG
PQSGGAITDLPVHVYEAMGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFS
ANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLE
RELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN
FELSLVGRLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcaataattgaagaacaggttcaggcaggcgctgccagcgcttctggctcgctgctt
gatgacatcatggctcaagcgcgtatcagcccggttgatgaaggctacagcgtggctaaa
cagggcattgccgcgctggtcgctaacattcttgatagcggtaatgcagcagaacccgtg
aacaaagcgctggtcgatagcatgattgtcgaactggacaaaaaactcagcaagcagatt
gacgttattctgcatgcgaaagaattgcaggaactggaatcctcctggcgttcgatgaaa
ctgctggttgatcgcaccgatttccgtgaaaacatcaaactcttggtgttgcatgcgacg
aaagaagagctgttggacgatttcgaattcgcgcctgaaatctcacagtctggcttctat
aagcacgtctattccagcggttacggtcagtttgggggccagcctatcggtggcgtgatt
ggtgactatgcgctaacgcaaagctcaccagacatcaaactgatgcagtatgtcagcgcc
gttggcgcgatggcacatgcgccgttcatctcttccgttgcaccgaccttctttggcgtg
gatcgcttcaccgatctgccttccatcaaagacctgaaatccgttttcgaaggccctgcc
tatacgaaatggcgttcgctgcgtgaatccgaagatggtcgctatctggggctgacggct
ccgcgcttcctggctcgcctgccttatgaccccgtagagaacccgattaagggcttcaac
tacaaggaagatatcagcaccgatcacgaacactatctgtggggcaataccgcctacctg
atgggaacggcgctgacggacagcttcgcgaaataccgctggtgtccgaacatcatcggt
ccgcagagcggcggtgcgattaccgacctgccggtgcatgtgtatgaagccatgggccaa
cttcaggccaagatcccgacagaagtcctgatcaccgatcgtcgcgaatatgaaatggct
gaagaaggctttatcacgctgacgatgcgtaaagacagcgacaatgcggctttcttctcg
gctaactcagtgcagaagccgaaggtgttcccgaataccaaagaaggcaaagaagcggaa
accaactacaagctgggtacgcaactgccgtacatgttcatcatcaaccgtctggcgcac
tacatcaaagtgctacagcgtgaacaaattggctcatggaaagagcgtcaggatcttgag
cgtgagttgaatacctggattaaacagtacatcgccgatcaggaaaacccgccggcagat
gttcgtagccgtcgtcctctgcgtgctgcacaaatcaaagtgctggatgtagaaggagaa
ccaggttggtatcaggtcaccatgtctgtgcgcccgcacttcaagtacatgggggcgaac
tttgagctgtcgctggtagggcgtttggataaggaataa

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