Pectobacterium actinidiae: M9782_19140
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Entry
M9782_19140 CDS
T08879
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacb03021
]
M9782_19140 (rpoS)
Transcription machinery [BR:
pacb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9782_19140 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WEF11250
LinkDB
All DBs
Position
complement(4340854..4341846)
Genome browser
AA seq
330 aa
AA seq
DB search
MSQSTLKVNELHEDTDFEENGLDVFDDKALAEEDTNDNDSAEDELLSQGVPQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQVQGLSIEELFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtacgctgaaagttaacgagttacatgaagataccgattttgaagaaaat
ggacttgacgtttttgacgataaagcgctggcagaggaagataccaatgataatgactcg
gcggaagacgagctattatcgcaaggggtcccacagcgtgtccttgacgcaacacagctc
tatttaggagagatcggctattcgccgcttttaaccgcagaagaagaagtttattttgcc
cgacgcgcgttgcgtggtgatgtcccatcacgccgccggatgatcgagagtaacctgcgg
ctggtagtgaaaattgcccgtcgttacaacaatcgtggtctggcgctgctggatctgatt
gaagagggtaaccttggcctgatccgtgcggttgaaaaattcgatccagaaagaggattt
cgtttttcaacctacgcaacctggtggattcgacaaacgatagaacgggcgattatgaat
caaacccgcaccatccgtttgccgattcacattgtcaaagaactcaacgtttatctgcgc
accgcgcgcgaattgtctcacaaactggatcacgagccgagtgcggaagaaattgccgaa
cagcttgataagccagtagatgacgtcaaccgtatgctgcgcctgaatgaacgtattact
tccgtcgataccccgttgggtggcgattcggaaaaagcattgctggatattctggcagac
gaaaaagataacggacctgaagacaccactcaggataacgatatgaagcagaatatcgtt
aaatggttgtttgagcttaatgccaaacagcgtgaggtgttggcgcgtcgttttggcctg
ctagggtacgaagcggctacgctggaagatgtgggtcgtgaaatcggtttaacgcgtgaa
cgtgttcgccagattcaggttgaaggcttacgccgcctgcgggaaattttgcaggttcag
gggttgagcattgaagaactgtttcgtgaataa
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