Pectobacterium actinidiae: M9782_19735
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Entry
M9782_19735 CDS
T08879
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00300
Lysine biosynthesis
pacb00470
D-Amino acid metabolism
pacb01100
Metabolic pathways
pacb01110
Biosynthesis of secondary metabolites
pacb01120
Microbial metabolism in diverse environments
pacb01230
Biosynthesis of amino acids
Module
pacb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M9782_19735 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M9782_19735 (lysA)
Enzymes [BR:
pacb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M9782_19735 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WEF11356
LinkDB
All DBs
Position
complement(4484963..4486225)
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AA seq
420 aa
AA seq
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MPHDLNDVTHALNAQSLRELPARFGCPVWAYDAQTIVNRIAQLRQFDTIRFAQKACSNTH
ILRLMREQGVKVDSVSLGEIERALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVN
AGSVDMLEQLGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQR
YQLKLVGIHMHIGSGVDYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAID
TEHYYGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDA
GFNDLMRPAMYGSYHHVSLLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFA
LPEAQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQMLDELLTLEAL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacacgacctgaatgatgtaacccatgccctaaatgcccaaagcctgcgtgaactg
cctgcccgctttggttgcccggtttgggcctatgatgcacagaccatcgttaaccgcatc
gcccaactgcgccagttcgacaccattcgcttcgcgcagaaggcgtgttccaacacgcat
attttgcgcctgatgcgtgagcagggggtgaaagtggattcggtctcgctgggtgagatc
gagcgtgcgctgattgctggatttgtaccgggtaccgatgcgcatgagatcgtgtttact
gccgatttgctggatcgcccgacgctgcaacgcgtttccgaactgaacattccggtgaac
gctggttcagtcgatatgctggaacagctcgggcagcagtctccggggcatccggtgtgg
ctgcgtgtgaatccaggttttggtcatggtcacagccagaaaactaacaccggcggcgag
aacagcaagcacggtatctggtacggcgatttgccgctggcgctggcccacattcagcgt
tatcagttgaagctggtggggatccacatgcacattggttccggcgtcgattacggccat
ctggaacaggtgtgcgaggcgatggtgcagcaggtcgttgagctgggtcaggatatcgag
gcgatttcagcgggcggcgggctgtcgattccgtatcgccacggcgaagaagcgattgat
actgaacactactacgggctgtggaacgcggcgcgcgagaaaattgctgcgcacctcggc
catccggtgacgttggaaatcgagccaggacgttttctggtcgcagaatccggcgtgctg
gtagcggaagtgcgggcgataaaatcgatgggaagccgtcactttgtgctggttgatgcc
ggatttaacgatctgatgcgtccggcgatgtacggcagctatcaccatgtttctttgctg
tcgggcgatggccgtgatatcagccagtccacgctgcgcgacagcgtgattgccggcccg
ctgtgtgaatccggcgatgtatttacccaacaggcgggcggcggcgtggaaacgttcgcg
ctgccggaggcgcaggttggcgactatctggtattccatgacaccggtgcgtacggtgca
tccatgtcctccaactacaacagccgcccgctgctgccggaagtgctgtttgagaacggc
gaaccgcgcctgattcgccgtcgccagatgctggacgagctgctgacgctggaagcgctt
taa
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