Pectobacterium actinidiae: M9782_20390
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Entry
M9782_20390 CDS
T08879
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00061
Fatty acid biosynthesis
pacb00071
Fatty acid degradation
pacb01100
Metabolic pathways
pacb01212
Fatty acid metabolism
pacb02024
Quorum sensing
pacb04146
Peroxisome
Module
pacb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M9782_20390
00071 Fatty acid degradation
M9782_20390
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M9782_20390
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9782_20390
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pacb01004
]
M9782_20390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pacb04147
]
M9782_20390
Enzymes [BR:
pacb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M9782_20390
Lipid biosynthesis proteins [BR:
pacb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M9782_20390
Exosome [BR:
pacb04147
]
Exosomal proteins
Exosomal proteins of breast milk
M9782_20390
Exosomal proteins of breast cancer cells
M9782_20390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WEF11478
LinkDB
All DBs
Position
complement(4638430..4640235)
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AA seq
601 aa
AA seq
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MNNHLQPYHVVHRVQDQINHCAGRITLREWKPAGEQQLTWTQAGQRIQRIASALLALGLD
VQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTAVQAAFIINDADIRTIFVGGQEQ
LDALLALRDTCPQLRNIIVMDEGVNLRGSDIAQSLHEFEAQAVDDFWRDEWQTRIDSRDL
NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDDRLDMSENDVSLCFLPLSHVFERAWS
FVIMHRGAQNVYLSDTNLVRAAMLAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF
NWAIAQGQHAFLASQAAKKGGLFRRVMHRYADRLVLGKLRQLLGGEIRFMPAAGARLDDN
IILFFRSIGIRIIYGYGMTETCATVSCWEEGRFRLGSIGTPLPGIEVRIGEEKEIQVRGA
TIMRGYFHRPQETAETFTEDGWLKTGDAGELDANGNLFITERLKDLMKTSGGKYIAPQHL
EGTLGQDRFIEQVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIEL
FEQRLREMQKELSRVEQVKKFTLLPVPFSMAEGELTPTLKLRRKIINQRYQLEIDAMYAE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcatttacagccataccatgtggtgcaccgggtccaagatcaaatcaatcac
tgcgcaggccgtattacgttgcgcgagtggaagcctgcgggcgaacagcagctcacctgg
acacaggccgggcagcgtattcagcgcattgccagcgcgctcttagcgctggggctggat
gtgcaggaacgggttgcgattttctctcataattcaatgaactggtcgctggccgatctg
gcgctgctgcatctgcgggcgatcagcgtgccaatctatgccacgaatacggcggtgcaa
gcggcatttattatcaatgatgcggacatccgtacgatattcgttggcggtcaggaacag
ttggatgcgctgctggcgctgcgcgacacgtgtccgcaactgcgaaacatcatcgtgatg
gatgagggcgttaacctgcgtggtagtgacattgcgcaatccctgcatgagtttgaagcg
caggcggtagacgatttctggcgtgatgaatggcaaacgcgtatcgacagccgcgatctc
aacgatctatttacgctgatttatacctctggtacgacgggtgaaccgaaaggcgtcatg
ctggattacaccaacatggcgatgcagcttaagctgcacgacgatcgtctggatatgtca
gaaaatgacgtatcgctctgtttcttgccgctttctcacgtctttgagcgcgcatggagt
tttgtcattatgcaccgtggcgcgcagaacgtgtatctcagcgatacgaatctggtgcgt
gcagcgatgctggcggtgaagcctaccgtgatgtgcgccgtgccgcgtttttatgagaaa
gtttacagcgcgatccatgaaaaagtggcgcaggcaccgtggtatcgtcagcgtctattt
aactgggccattgcgcaggggcaacacgcttttttggcaagccaggcagcgaagaagggc
ggcctgttccgccgcgtgatgcatcgctatgcagaccggctggtgttagggaaactgcgc
caactgctagggggcgagattcgctttatgccagcagcgggcgcgcgactggatgacaac
atcattctgtttttccggtcgatcgggattcgcatcatctatggctacggtatgactgaa
acctgtgcgacggtttcctgctgggaagaaggccgcttccgcttaggctctattggtacg
ccgctgccgggcattgaggtccgcattggcgaggaaaaagagattcaggtacgtggcgca
accatcatgcgggggtatttccatcgtccgcaggaaaccgcagagacctttactgaagac
ggctggctgaaaaccggcgatgcgggtgaactggatgctaacggtaacctgtttattacc
gagcggttgaaagatctgatgaaaacctcgggtggtaaatatatcgcaccgcagcatctg
gaaggcacgctggggcaggatcgcttcatcgagcaggttgcgattattgctgacacgcgt
aagtacgtgtctgcgctgattgttccctgcttcgaggcgctggaagaatacgctcactct
atcaacctgaagtatcacgatcgtctggagttgctgcgtcacagccatattattgagctg
ttcgaacagcgcctgcgggagatgcagaaggagctttcccgcgttgagcaggtgaagaaa
ttcacgctgctgcctgtgccgttttcgatggcggaaggggaactgacgccaacgctcaaa
ctgcgtagaaagatcatcaaccagcgttatcagttggaaattgatgcgatgtacgcagag
tcttga
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