Pectobacterium actinidiae: M9782_21630
Help
Entry
M9782_21630 CDS
T08879
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb00040
Pentose and glucuronate interconversions
pacb01100
Metabolic pathways
pacb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M9782_21630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9782_21630
Enzymes [BR:
pacb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
M9782_21630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WEF11703
LinkDB
All DBs
Position
4900825..4901949
Genome browser
AA seq
374 aa
AA seq
DB search
MKYLLPTAATGLLLLAAQPAMAANTGGYATTDGGDVSGAVKKTARSMKEIVDIIEAAQVD
SKGKKVKGGAYPLFITYSGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITIQGTNGS
SANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGSSNTDTGRNLTYHHNIYRDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNITKPADFSKYKITWGKPSSPHINADDWKSTGKFPTVSYKYTPVSAQCVKDKLANYAG
VGKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatctattacctactgcagccactgggttgttattgcttgcggctcagccagcc
atggcagcaaatacgggcggttatgccactacggatggtggcgacgtttctggcgccgtg
aaaaaaacggcacgttctatgaaagaaattgtggatataattgaagccgcacaagtggat
tcaaaaggcaagaaagtcaaaggcggtgcttacccgctcttcatcacctatagtggtaat
gaagattcattaatcaaagcggctgaaaagaatatctgcggccagtggagcaaagacgct
cgcggcgtacaaatcaaagaattcaccaaaggcattactattcagggcaccaatggctca
tccgccaacttcggtgtttggatcgtgaactcttctaacgttgtggtacgtaacatgcgc
tttggctatatgccgggcggcgcgcaagacggtgatgccattcgtatcgataactcacca
aacgtctggatcgaccacaacgagatctttgccaagaactttgagtgtaaaggcacgcca
gataatgacacgacctttgagtcggctgtcgatatcaagaaagggtcaactaacgtcacg
gtatcctacaactatattcatggcatcaagaaagtcggcctgagcggttcaagcaatacg
gatacgggtcgtaacctgacttatcatcacaatatctatcgcgatgttaactcacgtctg
ccgctacagcgtggtggtttggttcacgcgtacaacaacctgtatgacggcatcaccggt
tcaggctttaacgtccgccagaaagggatcgcgctgattgaaagcaactggttcgagaat
gcgctcaacccagtgacagcacgtaacgacagctccaactttggtacctgggagctgcgt
aacaacaacattacgaaaccggcagacttctccaaatacaaaatcacctggggaaaacct
tcctctcctcacatcaatgcggatgactggaagagcaccggtaagttccctaccgtctcc
tataagtacaccccggtttctgcacagtgcgtgaaggataaactggcaaactatgctggc
gtaggcaaaaacctggcagtgctgacagcagctaactgcaaataa
DBGET
integrated database retrieval system
