Cutibacterium acnes C1: PAC1_04080
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Entry
PAC1_04080 CDS
T02330
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pacc
Cutibacterium acnes C1
Pathway
pacc00470
D-Amino acid metabolism
pacc00550
Peptidoglycan biosynthesis
pacc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pacc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAC1_04080 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAC1_04080 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pacc01011
]
PAC1_04080 (murD)
Enzymes [BR:
pacc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PAC1_04080 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pacc01011
]
Precursor biosynthesis
Amino acid ligase
PAC1_04080 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
NAD_binding_7
AlaDh_PNT_C
2-Hacid_dh_C
DUF2007
Motif
Other DBs
NCBI-ProteinID:
AFU40580
LinkDB
All DBs
Position
848291..849787
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AA seq
498 aa
AA seq
DB search
MGGRAVTFSGKVDLSAADRLFDWSGVHVVIAGLGTSGYAAADALLELDATVLVLDDSDDD
SHRDKGGLLEVLGAEVRLGPGSASDLPEETDLVVVSPSWRPTQPLVARALTRGIPVWGEP
ELAWRLMHPDRVIPWLAITGTNGKTTTTQMTESILHAAGLKACAVGNIGRPILEAMADEI
NYDVFAVELSSFQLHWSNSLSLHSAAVLNLHQDHLEWYAHESDPLGSYAADKARIYHQVT
NSCVYNVADPATEHMVEDADVVEGARAIGFTTGTPGPSMIGIVDGLIVDRAFVEQRATSA
MKLARLEDVHPFAPHNVENALAAAALTRSFGVPAPAVGQGLRDLHLGGHRIETVHQAGGI
TWVDDSKATNPHAANSSMRAFEHIVWIAGGQAKGTHFDNLVTTHAGKLRGVVVLGTDRGI
IARSLAEHAPQVPVVVIDDMSREAMARAVHEAAKMARPGDTVLMAPGCASLDIWPGYAAR
GEDFANAAQHVDGPDADG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcagggcagtgacgttctccggaaaggttgatctcagcgcggctgaccggctc
ttcgactggtctggtgtgcatgttgtcatcgctggtttaggcacgtccggctatgccgcc
gctgacgcgttacttgagcttgacgccacggtcctcgtccttgacgactccgatgacgac
tcccaccgtgacaaaggtggtctgctggaggtcctcggggccgaagtgcgtttgggcccc
ggatcagcatccgacttgccggaggaaacggacctcgtcgtcgtctctcctagctggcgt
cctacccaaccgctggtagctcgtgcccttacgcgagggatccccgtttggggtgagcct
gaactggcctggcgcctcatgcatcccgaccgtgttattccgtggctggcgattaccggc
accaatggcaagacgacgactacccagatgaccgagtcgattcttcatgcggcaggtctg
aaggcatgtgctgtcggtaacattggccgacccatccttgaggccatggctgacgagatc
aactacgacgtttttgcagtggagctgtccagcttccagctgcactggtcaaactcactg
tctctccattccgcggcagtgctcaaccttcatcaagaccacctggagtggtacgcccac
gaatcggatccgctcggttcgtacgccgccgataaggctcggatctaccaccaggtgacc
aactcctgcgtctacaacgttgccgatcccgccaccgaacacatggtggaggatgccgac
gtcgttgagggggctcgcgctatcgggttcacgaccgggaccccggggccgtccatgatc
ggaattgtggacggcctcatcgtcgatcgtgccttcgttgagcagcgcgcgacctcggcg
atgaagctggctcgccttgaggacgtgcaccctttcgctccgcacaatgtcgaaaacgcg
ttggctgctgcggcactgacccgctcctttggtgttcctgcgcctgccgtcggacagggt
ttgcgtgacttgcatcttggtggacaccgcatcgagacggtgcaccaggccggtggcatt
acctgggtcgatgattccaaggcgacgaacccccatgctgcaaactcctcgatgcgggcc
tttgaacacatcgtgtggatcgctggtgggcaggccaagggcacgcattttgacaacctc
gtgaccactcatgctggcaagctgcgtggcgtcgtagtgctgggaactgaccgcggcatc
atcgcgagatctttggccgagcatgctccacaggttccggtcgtcgtcattgacgacatg
tcccgcgaggcgatggctcgtgcggtccacgaggctgccaagatggctcgtcctggggat
accgtcttgatggcacctggctgtgccagcttggatatctggcccggctatgccgcacgc
ggtgaggactttgccaatgctgctcaacacgttgacgggccagatgccgatggctga
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