Cutibacterium acnes C1: PAC1_06890
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Entry
PAC1_06890 CDS
T02330
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pacc
Cutibacterium acnes C1
Pathway
pacc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAC1_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacc03400
]
PAC1_06890
Enzymes [BR:
pacc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PAC1_06890
DNA repair and recombination proteins [BR:
pacc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAC1_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
AFU41131
LinkDB
All DBs
Position
1428468..1431617
Genome browser
AA seq
1049 aa
AA seq
DB search
MAGVVKVFHSWRCVSDAVVAALSEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGI
DTTTPLGLRERLEEDLLGVKRENDPWQPGSLALRICRVIENNSPGFEVVSAHLEASRRQG
VPRATWTTARQAADAICALARDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPL
WRTLLAEPCHVPDPVSRHQLLVDAILTQSRSEPPIVWFSSTTTAQHDVSLAEALSASHDV
TIVHLDHGISGADPWRTFDRARSATTARWTSSSICTAQSAVTHRKELPTVEIHQCHGVDR
QAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAHLLSAGTLADIDHPAHQLRFTTPPQ
REHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVQTRFGFSDDDQEAIERLVSQADIR
WGVDPAARDKAGLGRIKQSTWLAGIERMILAIAMSSTPPTYLGTVTPITDVGSTTIPLVG
KLAELVSRMRKAFLDTETPAPIATWKRRVSQIVDNLAAAPADAPRSALQTFALLTGLEGV
AEDREFDRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPVDHEVVIVVDPDQEAVH
ADLLQGLRDENLDPAAKARQDLLDVALSARTLLVVVRQARSPVSNLTVLPGPFTRTLSQA
LKAQSATPRCVKHGLQPFSADEFSHHSDTAWSGFDNTAAAAAGCHPGSQPRPHRVVLPPV
AKLPESRMSLIDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRI
LADLEHGFLLDDAINAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIE
IDFDLDEGNSPPLLWPDELIVDPMHPVHLHGRVGVRNHQIVHAVASRANARPLLDLWVDL
LAVTVATDEPGWFGVLVPNGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAH
ALVELSPMAHNDYRTGASALQVQWSREWDPNWAAFLGTDVGELIACCHELGTTLTELSEW
LFDPIKQALRGAGSSPSTMAQFSNSGRRA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggtgaaggtcttccattcctggcgctgcgtcagtgacgccgtcgtagca
gctttgtcggagcccaccaccgatccattcgtccggccgattctggttgctcctggcaat
gctcagtctcgatctttgctgcaatcccttgcccgccgtcatggaatcgccgccggtatc
gatacaacaacgccgctgggcctacgagaacgactcgaggaagatctcctgggagtcaag
cgggaaaacgatccgtggcagcccgggtccctggccctgcgtatatgccgcgtcattgag
aacaattcccccggttttgaggttgtttcagcccatctggaagccagccgtcggcaagga
gtgccgcgtgcaacatggacaactgcacgacaagctgcagacgcgatctgcgcgctagct
cgcgactctcacgacgtcttgaatgcctgggccgacggtgccacccccacaactcaccag
ggtgatactgaccttgcgggtgaccccctggatcccgcccgcgcgtggtgggccccgctg
tggcgtacccttcttgccgaaccatgccatgttccggaccccgtgagccgacaccagctc
ctcgtcgacgcgatactcactcagtcacgatctgaaccgccgatcgtgtggttttcatcg
acgaccacggctcagcacgacgtcagcttggcggaagcgttgtcggcctcacacgacgtc
accatcgtccatctcgatcatggcattagtggtgcggatccgtggcggacctttgaccgg
gcgcgctctgccacgaccgcgcgatggacatcgtcatcgatctgtacagcgcaaagcgcg
gttacccaccgcaaagagctgccaacagtcgaaatacaccaatgccacggagttgatcgt
caggccgaagtagtgcgtgatgttgtatgcgcagctctcgccgactacccaaccttggaa
cccagggacatcgtcgtcatatgttgcgggcgccaggacaccgcccaccttctttccgct
gggactttggcagatatcgatcaccctgcacatcagttgcggttcacgacccctccgcaa
cgcgagcatgttaatcccgtcactgaagcggtaacgaccatcttgggcctggcctcctca
cgtgccacgggacaagacttactcagtctgtgcgccatgcctgcggtgcagactcgattc
ggattctccgatgacgaccaggaggcgattgaacggctggtgagccaggccgatatccgg
tggggagttgaccctgccgcaagggacaaggcagggctgggccggatcaaacaatcgacc
tggctggctggcatcgaaaggatgattctcgccatcgcgatgtcgtctacaccaccaact
tatctggggacagtgacgccgattactgacgtcggatcgacaacaatccccctcgtcggg
aaactcgctgaactcgtatcccgaatgcgcaaggcgttcctcgacactgaaacacctgca
ccgattgccacctggaaacgccgggtcagccagatcgttgacaaccttgctgccgctccc
gcagacgctcctcgatcggcgctacagacttttgccctgctgacaggtctggaaggggtc
gcagaagacagagagtttgatcgccaggagatcattgacctcctcaactggctctcaggc
atccatcgtgggcggcacagctggttcgatggatcaattcaggtgtgccgtccgggtgag
cttacccccgtcgaccacgaagtcgtgattgtcgtcgaccccgaccaagaagctgttcat
gccgatctccttcaaggcttgcgagatgaaaacctcgatccggctgctaaagcacgacaa
gaccttctcgacgtcgctctgtcagccagaaccctcctggtcgtcgtgaggcaggcgcgc
agccctgtgagcaacctcaccgtgctgccgggcccctttacgagaaccctctctcaagct
ctcaaggcgcagtccgcaacaccgcgttgcgttaaacacggtttgcaaccattctctgcc
gatgaattctctcatcacagtgataccgcttggagtggattcgacaacaccgcggccgca
gcggcagggtgtcatcctggatcacagcctcgaccccatcgtgtcgtattgcccccggta
gccaagttgcctgaatcccggatgtcccttatcgacctcactctcgccctgtctcacccg
gcacggacgctcttgcgagcccgtgctggtgcaccagctaatgaaagatctactgacctt
ccggtcgacctgccactggcaccaagctcattagacaaatactggatacgttcccggatc
ctggctgacctggaacacggttttctgctagacgacgccatcaatgctgaacggctccgc
ggctctactcctccagggcacctgggccagcacatcgtcaccaaattggctgaggacgcg
atgcagatttgtcagagggccaatcggctccgtggcgaccaagacgagcagttcatcgaa
attgacttcgatctcgatgagggtaacagccccccattgctatggcctgacgaactcatt
gtcgatcccatgcacccagttcacctgcatggtcgagtcggtgtgaggaaccatcagatt
gtccacgctgtcgcatcccgggcgaatgctagaccgctcctcgacctgtgggtcgatctg
ctcgctgtgaccgtcgccactgacgaacccggatggtttggagtcctggtcccgaacggc
gacgtcctgcggatggcttccccagcgccggatcatgctcgcgacatcctggctgggctc
gcccgagtcgcctggtggagcaaccagcaactcatcccgttgcctgtgaaattggcacac
gcgctcgtcgagttgtcccccatggcgcataacgactatcgcaccggagccagcgccctc
caagtgcagtggtcgcgagaatgggatccaaactgggcggcatttttgggaaccgatgtg
ggtgagctcatcgcctgctgccatgagttaggtaccaccttgacggaactttccgaatgg
cttttcgatccgattaagcaggcgttgagaggggctgggtcttcaccatcgacgatggca
cagttttcgaattcggggaggagggcatga
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