Cutibacterium acnes C1: PAC1_07760
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Entry
PAC1_07760 CDS
T02330
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pacc
Cutibacterium acnes C1
Pathway
pacc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAC1_07760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacc03019
]
PAC1_07760
03016 Transfer RNA biogenesis [BR:
pacc03016
]
PAC1_07760
Enzymes [BR:
pacc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PAC1_07760
Messenger RNA biogenesis [BR:
pacc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PAC1_07760
Transfer RNA biogenesis [BR:
pacc03016
]
Prokaryotic type
tRNA degradation factors
PAC1_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
PCB_OB
KH_KhpA-B
KH_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
AFU41305
LinkDB
All DBs
Position
complement(1604777..1606978)
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AA seq
733 aa
AA seq
DB search
MEGPGLEFTEAIIDNGKLGKHVVRFEAGLLAQQADGSAAVYLDGDTMLLSATTAAKTPRD
SIDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEGAILACRLIDRPLRPSFVKGLRNEVQ
VVVTVMALNPAVYYDVVAINAASMSTQLAGLPFSGPIGGVRMALIDDQWVCFPSVDQRKE
STFDMVVAGRVLADGDVAIMMVEAESTPATWGLVRGGRTAPTEEVVATGLEAAKPFIKVL
CDAQVALAAKLPKETYDFPVFKDYEDDVYAAVEEKAADELSRIEQIAAKLERQEAESELK
ARIKAELAETFPEREAEISGAFKAVMKKIVRKRVLDEGVRIDGRGPRDIRSLSAEVGIIP
RVHGSALFQRGETQILGVSTLNMLDMEQKLDTLSPENTRRYMHNYNMPPYSTGETGRVGS
PKRREIGHGNLAERALIPVLPTREEFPYAIREVSEAIGSNGSTSMGSVCASTLALLNAGV
PLRASVAGIAMGLMSETDEDGKTKYLALTDILGAEDALGDMDFKVAGTSEFVTALQLDTK
LDGIPADVLAGALKQAKEARTAILEVMNEAIDSPDEMAPTAPRIITVHIPVDKIGEVIGP
KGKMINQIQDDTGANISIEDDGTIFIGADNGDSAESARSMINAIANPQMPEVGERYLGTV
VKTTSFGAFVSLLPGKDGLLHISKMRDLNDGKRVEAVEDVLSVGQKIQVEIAEVDDRGKL
SLVLASDEDDADE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggagggacctggactcgagttcaccgaggccattatcgataacggcaagcttggtaag
catgtcgtccgttttgaggcgggactgctggctcagcaggcggatggatccgccgccgtc
taccttgatggtgacactatgctgctgtcggccactacggccgctaaaactcctcgcgat
tccatcgactttttcccgctgacggtcgacgtcgaggagcgcatgtatgccgccgggcgt
atccccggctcctttttccgccgtgagggacgtccgtccgagggtgccatcctcgcctgc
cgcctcattgaccgcccgctgcgtccgtccttcgttaagggactgcgtaacgaggtccag
gtcgtcgtcactgtcatggctctcaacccggccgtttactacgacgtcgtcgccatcaat
gccgcctcgatgtccacccagcttgctggtctgcccttctccgggccgattggtggcgtc
cggatggctctcatcgacgaccagtgggtgtgcttcccttccgtcgatcagcgtaaggag
tcgaccttcgatatggtcgtcgctggtcgtgtgctagccgacggcgacgttgccatcatg
atggttgaggcagagtcgaccccggctacttggggcctcgtgcgcggcgggcgcaccgct
ccgacggaggaagtcgtcgctaccggtctggaggccgccaagcctttcatcaaggtgctg
tgtgacgctcaggtcgctctggctgccaagctgcctaaggagacctacgacttcccggtt
ttcaaggactacgaggatgacgtctacgctgccgtcgaggagaaggctgctgacgagctc
tcccgcatcgagcagattgctgcgaagttggagcgtcaggaggctgagtccgagctcaag
gcccgcatcaaggccgagctcgctgagacgttcccggaacgcgaggctgagatttccgga
gcgttcaaggccgtcatgaaaaagatcgtccgcaagcgcgtccttgacgagggcgtgcga
atcgacggtcgtggaccgcgtgatatccgctccctgtcggctgaggtcggcattattccg
cgggtccacggttcagccctgttccagcgcggcgagacccagattctgggcgtgtcgact
ctcaacatgctcgatatggagcaaaagcttgacaccctctccccggaaaacacccggcgg
tacatgcacaactacaacatgccgccgtactccaccggtgaaaccggccgtgttggttcc
ccgaagcgtcgcgagattggtcacggtaacctcgccgagcgggccctcattccggtgttg
ccgacccgcgaggagttcccctacgccatccgcgaggtttccgaggctattggctctaat
ggttcgacctcgatggggtcggtttgcgcctccaccctcgccttgctcaatgccggtgtg
ccgctgcgcgcctcggtcgctggaatcgccatgggcctcatgagcgagactgacgaggac
ggcaagaccaagtacctggctctcaccgacatcctcggtgctgaggacgccctcggcgac
atggactttaaggtggccggtactagcgagttcgtcactgcactgcagctggacaccaag
ctcgacgggatccctgccgacgtgctcgccggtgctctcaagcaggctaaggaggctcgc
accgcgatccttgaggtgatgaacgaggccatcgattctcccgatgaaatggccccgact
gctccgcgcatcattaccgttcacatcccagtggacaagatcggtgaggtcatcggcccc
aagggcaagatgattaaccagattcaggacgacactggcgccaatatctctattgaggac
gatggcacgattttcatcggggctgataacggagattcggccgagtctgcccgttcgatg
attaacgcgatcgctaacccacagatgcccgaggtcggtgagcgttacctcggcaccgtc
gtcaagacgacgagctttggcgctttcgtctctttgctgcccggcaaggatggtctgttg
cacatctccaagatgcgtgaccttaacgacggtaaacgcgtcgaggccgtcgaggacgtg
ctgtcggtcggtcagaagatccaggtggagatcgccgaggtcgatgaccgtggcaagctc
tccttggtgctggcttccgacgaagacgacgctgatgagtga
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