Cutibacterium acnes C1: PAC1_09360
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Entry
PAC1_09360 CDS
T02330
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pacc
Cutibacterium acnes C1
Pathway
pacc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pacc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAC1_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacc03021
]
PAC1_09360
03400 DNA repair and recombination proteins [BR:
pacc03400
]
PAC1_09360
Enzymes [BR:
pacc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAC1_09360
Transcription machinery [BR:
pacc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAC1_09360
DNA repair and recombination proteins [BR:
pacc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAC1_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFU41621
LinkDB
All DBs
Position
complement(1963202..1964218)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGASVTSIKIEGVQ
HEFSTIEGCVEDVTEIILNLKGLVLSSEEDEPVAMYLRKSGAGEVTAADINPPAGVTIHN
PELHIATLNDDGRFEMELIVERGRGYVSSALNDDPNAEIGRIAVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKPSILPRDAIASAGKTLVELFGLTRELNAEAEGIEIGSGPVD
EEYAESLGTPVEELNLTVRSYNCLKREGIHTVGELVSRSEQDLLAIRNFGSKSIDEVKEK
LTELGLALKDSAPGFDPLAAAEAYDEANDDDYAETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcattgcacagcgccccactctcactgaagagtccatctccgaattccgctcgaag
ttcgtcatcgagcctctggagccgggtttcggatacaccattggcaactcgctgcgtcgc
accctgctgtcgtccatcccgggcgcctctgtgacgagcatcaagatcgagggagtccag
cacgagttctcgactattgagggctgtgtcgaggacgtcaccgagatcattctgaacctc
aagggccttgtgctctcctcggaggaagacgagccggtcgccatgtatctgcggaagtcc
ggtgccggcgaggtcaccgctgccgacattaacccgcctgccggtgtgaccatccacaac
ccggagttgcacatcgcaaccctcaacgacgatggccgcttcgagatggaacttattgtc
gagcgtggccgcggctacgtctctagcgccctcaacgacgatccgaatgccgagatcgga
cgcatcgccgtcgactcgatctactccccggttctcaaggtcacctacaaggttgaggcc
acccgagtcgagcagcgcacggacttcgacaagctcgttgttgacgtcgaaaccaagccg
tccatcctccctcgcgacgccattgcctccgctggcaagaccctcgttgagctgttcggg
ctgactcgcgagctcaacgctgaagctgagggcattgagatcggttccggaccagtcgac
gaggagtacgccgagagcctcggcaccccggtcgaggagctcaacctcaccgtccgttcc
tacaactgcctcaagcgtgagggcatccatactgttggagaactcgtctcgcggtctgag
caggacctgctggccatccgtaactttggatccaagtcgatcgatgaagtcaaggaaaag
ctcaccgagcttggcctagccctcaaagactcggctccggggtttgacccacttgccgca
gctgaggcctacgacgaggccaatgacgacgattacgcggagactgagcagtactga
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