Propionibacterium acidifaciens: EGX94_03005
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Entry
EGX94_03005 CDS
T05713
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
pacd
Propionibacterium acidifaciens
Brite
KEGG Orthology (KO) [BR:
pacd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EGX94_03005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacd03021
]
EGX94_03005
Transcription machinery [BR:
pacd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EGX94_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Sigma70_r2
Helicase_C
Sigma70_r4
DEAD
ERCC3_RAD25_C
Sigma70_r1_2
Flavi_DEAD
SWI2_SNF2
AAA_30
Cas3-like_C_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AYW77184
LinkDB
All DBs
Position
complement(693091..696165)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSAEDGRVSDLVVPSAGVPRTTDLVLVRPAPEACPGSGTPEADARVPLRAWQAEALAAWR
DADRTGVVEAVTGAGKTRVGIAAVSEAATAGMRAVVLVPTRTLVAQWADSLHELLPGMAV
STDLRASQPWRVMVTTVQAAHRRPALRQGESGLLVADECHRYGAESFSRALRPEYAWRLG
LTATLARGDAGDSILRDYFGPVRFGMGYQRAAADQLIAPFKIAFAAVPLGRDERETYDEL
EETLFDVRKKLVQHHGLEPEPVGEFLKQVSRLAEQGESSAGRRLARCYLARFADRRALLS
GTRMKALALEGLAPAVRASAGAIVFTQTKEGSREAAEVLGSAGCRAAAMHSSMADQEREE
RLELLRDGSVDAVSAPRILDEGVDVPDADLGVVMAATKSCRQMIQRLGRVLRRRRGKIAR
FVVLYAQDTVEDPLARRPVSSGQQDFYAECTPAACEMGEFDLGTEDGLPHLLEFLAADPR
AGRAVQERMIRAAGPDTGRNASQRTGGRAADAGHGPGRPRSTGAVASDAGGRDGSASDRA
PVGLRSDGRGRKGGRPRRPGGGEPSADALRDYREAIRRYPLLDAEDERRLGALIEAGLYA
QHLLEAADERFDEEDLRRIAAEGRAARHQFITSNLRLVVSIAARHRSRGMEPIDLVQEGN
LGLIRAVEKFDHRRGNKFSTYATWWIRQSVTRALADRGALIRVPVHFEEKRRAADRIRRG
EGLGWGGFVRAHPDGLLDRAISADELGRAARLSRPVLDVDLLDEDARIIAVPGAGQPPPD
PEELVERFDPDREATEILECLGAEDPRAMRILRYRYGLVTGEPETLDVIGTRFGLTRERI
RQIKKKALERCRGIAAELAAGPPVSPEAVATRTVPRGGARTAPRAPAEPGPAMAASRAGA
PRAVGRAAGTASRAGSGALGRRGPSVGAIPPGPSGTAGRKTTAGGAAGGPARSVLRRREA
APGIEEPRREQAPRRALPDSVVALYRPRRALPGDVPPESGHRPRRVLDEDSEQERYRPRR
GRDA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgaggacggtcgcgtgagcgatctcgtggtgccgagtgccggcgtgccgcgg
accaccgacctggttcttgtgcgccccgctccggaggcctgccccggctcgggaactcct
gaagccgacgcccgcgtccccctccgcgcctggcaggccgaggcgctcgccgcatggcgc
gacgcagaccgcacgggcgtcgtcgaggcggtgacgggagcgggcaagacccgcgtcggc
atcgccgcggtgagcgaggcggccaccgcggggatgcgggcggtggtgctcgtgccgacc
aggacgctcgtcgcccagtgggcggattcgttgcacgaactgctgcccggcatggcggtg
agcaccgacctgagggcgtcgcagccctggcgggtcatggtgaccacggtccaggcggcc
caccgccgtccggccctgcggcagggggagagcggtctgctcgtcgccgacgagtgtcac
cgctacggggccgagtcgttctcacgggcgctgcgccccgagtacgcgtggcggctgggc
ctgacggcgacgctggcccgcggagacgccggtgacagcatcctgcgcgactacttcggc
cctgtccgcttcgggatgggctatcagcgggccgccgccgaccagctcatcgcccccttc
aagatcgctttcgccgccgtgcccctcggccgtgacgaacgggagacctacgacgagctg
gaggagaccctgttcgacgtccgtaagaagctggtccaacaccatggcctcgagcccgaa
ccggtgggcgaattcctgaagcaggtgagccggctggccgagcagggggagtcctccgcg
ggccgtcgtctcgcccgctgctacctggccaggttcgccgaccgccgcgccctgctgtcg
gggacgcgcatgaaggcgctggcgctcgagggcctcgcccccgccgtgcgggccagcgcg
ggggccatcgtcttcacgcagacgaaggagggcagccgcgaggccgcggaagtcctgggc
tccgccggctgccgggcggccgccatgcactcgagcatggccgaccaggagcgcgaggaa
cggctcgaactgctccgcgacggctcggtcgatgcggtctcggcgccgcgcatcctcgac
gagggcgtcgacgtgccggacgccgatctcggcgtcgtcatggccgcgaccaagagctgc
cgccagatgatccagcgcctcggccgcgtcctgaggcgcaggcggggcaagatcgcccgc
ttcgtcgtgctctacgcgcaggacacggtcgaggatcccctcgcccggaggccggtgtcg
agcgggcagcaggacttctacgcggagtgcacccccgctgcgtgcgagatgggggagttc
gacctcggcaccgaggatggcctgccgcatctgctcgagttcctcgccgccgatccccgg
gcgggccgggcggtgcaggaacggatgatccgggcggcgggccctgacacgggccggaac
gcctcgcagcgcaccgggggccgtgcagccgatgccgggcacgggcccggccgcccgcgg
agcaccggcgcagtggcgagcgatgccgggggccgggacggctccgcctccgaccgcgcg
cccgtcggcctccggagcgacggcaggggccggaagggcggccgtccgaggcgccccggc
gggggcgagccgtcggcggacgcgctgcgcgactaccgggaggccatcaggaggtatccg
ctgctcgacgccgaggacgagcgccgcctcggcgccctcatcgaggccggcctctacgcc
cagcacctcctcgaggccgctgatgagcgcttcgacgaggaggacctgcggcgcatcgcg
gcggagggccgggccgcccgccaccagttcatcacctcgaacctgaggctcgtggtgtcc
atcgccgcgcgccaccggagccggggcatggaacccatcgacctcgtgcaggaggggaac
ctgggcctcatccgggccgtcgagaagttcgaccaccggcgcgggaacaagttctccact
tacgcaacctggtggatcaggcagtccgtcacgagggccctcgccgaccggggcgccctc
atccgcgtgccggtgcacttcgaggagaagcgccgggcggccgaccgcatccgccggggc
gagggtcttggctggggcgggttcgtccgggcgcaccccgacgggctgctcgacagggcg
atcagcgccgacgaactggggcgcgccgccaggctctcgcggccggtgctcgacgtggac
ctgctggacgaggatgcccgcatcatcgctgtccccggggccgggcagcccccgcccgat
cccgaggagctcgtcgaacggttcgacccggaccgggaagcgacggagatcctcgaatgc
ctcggcgcggaggatccccgggcgatgaggattctgcgttaccggtacggcctggtgacc
ggggagcccgagaccctggacgtcatcgggacgcgcttcggcctcacccgcgaacgcatc
cgccagatcaagaagaaggcgctcgagcggtgccgtggtatcgccgccgagctcgccgcc
gggccgccggtctcaccggaggccgtggcgacaaggacggtgccgaggggaggggcgcgc
acggcgcccagggcgcccgcggagccggggcccgcgatggccgcctcgagggcaggcgct
ccgagggcagtcggacgcgcggcggggacggcctcccgagccggttccggggccctcggg
cggagggggccctcggtcggcgcgatcccgccggggccttccggaaccgcgggtcggaag
acgactgcgggtggcgcagcgggcgggccggcgcggagcgtgctccggcgccgcgaagcg
gctcccgggatcgaggagccgagacgggagcaggcgccgaggcgcgccctgccggactcc
gtcgtggcgttgtaccggccgcggcgggccctgcccggcgacgtgccgccggaatccggc
caccgtcccagacgggtcctcgacgaggactcggagcaggagcgctaccgcccccggcgg
gggcgcgacgcctga
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