Propionibacterium acidifaciens: EGX94_04890
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Entry
EGX94_04890 CDS
T05713
Name
(GenBank) type IV secretion protein Rhs
Organism
pacd
Propionibacterium acidifaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AYW77502
LinkDB
All DBs
Position
complement(1148587..1154067)
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AA seq
1826 aa
AA seq
DB search
MAEYSGRLGAYDEPVAFDDATADTLKSAATVLSGTLTGQAASRSSWASTASTDFEGHYAD
VFDTNARMASTDCTNIASALDDLVAEVQKLKEAAQAERERRRRAKEWADRQDRENIVKRG
WDWVSNGDKPPAGPAQVPLPQPHEVTTTPWSEPAPGQAGGVSSARPDDLRTYSSNVTGAN
DTVTTQKGTLEGALSDFADRCSWCSIDTSGITTALASFGANNTNETRWVDTVAAAFEAAG
GSGAISAVSDAALDASLQAAGVARTRRPVDVTAPTILGDPQTSGYADDPVNTTTGNFVEP
ETDLSFDGGCASLGFDRVYNSLSAGIGAFGPGWASTADQRLLVTEDGAVWVQPSGRHVVF
PRLGNGWDRAHNDTYWLHTTTDTTGPTPGDAPTTGAAGGAGVFVVSDNAGGRWVFDRAGR
PVSVSRGPGTRVDHRWDGDRLVGLTHERGRAVTIEWNDHHTRITALAASDGRRVDYGYDP
AGRLLEARTAGGARRYGWNEQGLIATVTDPDGVVEAANTYNEHGQVTSQRSRFGRLSHYT
YLPGGVTQVADEDGGRANTWIHDQTGRLVGMVDADGNRQSIGWDQWGNRVQITGRDGRTT
VCRYDARGRLITRQEASGARTDYEWDEADRVVQVTVTDTTSSSHGNTSSAGGSGPSVTSY
EYEGAGRNPSTVTDPEGGVTRLVWDQNLLTEVVDPAGVRVRLGYDGHGDLVSAMNADGDT
ARLARDGAGRVVAAVTPLGHRTEYRYDEAGRLASRQDPDGALWRYEHTTGGRLSAVVDPD
GCCRRYGYGGHGERETFTDPLGEVVTSRWDDLGNLAETVMPDGARWRYVHDGLSRLVATV
DPAGGAWRREYDVNGALAATVDPTGVRVDWVTSNRGRVRTVSDGAASGAVRTDGLGRVTV
TTGDDGADRVTRYDRCGRPVEFIDGEGNTTRLVRDPAGRVNAVVRPSGAVTRYGYDVCGR
LARVTDPAGGVACFVYDGDSRLVEEARPGGERAWWSYDECGRVTVKHAPGYGTTRYAYDR
SGRVTGLADPVCGRRRFRYDRAGNLVEAVSGTGGVTRYGYDTAGALVQVTDPAGGVTRYE
RDELGRVVKLVDPLGRVTVGEYDAAGRQTSQTGPDGHVTGWSYDRTGRFEALSWDGAVHH
RVVRDFVNRLMRVTETGGVTHTVRWDHAGRLVERARDGRAVSWGYDADGRRAWMRTPDGR
SVRYGYDPAGRLTQVTSSAFGRVVYEYGPSGRMVAATAGGTRQEWEHTDGFVTGHIVRHG
GVVSHTAVGRDEQGRVAWTSRDGAHTAYTYDGANQLTATTGDGGTTAFTWDPAGRLVAET
TPDGGRVDYTWDAAGQLTRVDTTGRDTGRDDGGRDASRDGDGRDGDGGEGLSVWFSYDAA
GRRVREEHADGTIRTYGWGPLARLETVTIDSALERARTSLFTDALGELAALDGRPLDWDT
AVGFPSLLSAADTSMISVPGFTATTGAGWQTPGWRTTRTTGGTDPWAAGAGTPLDTTPAA
GGGLLLGRAGELVLPGGLELLGARVYDPTTRAFLSPDPQDPTTGAGWAGNPYAYAANNPV
AFTDPSGLHPLSDADMNAWRDAHKTGVAAAGDWLKDNWEYIAAGAAVVAGVALMCTGVGG
PAGVALMSLSGALTSGGISIAQQKATNGSVDWARVGTEAAIGAIPVPGGGGAAAGREAAE
TAGREALEATGREVAETTGREAAEQAARTTGEHELSTIGTDAAENVGEHASQTNYIYSSR
VLNRSAEAGDSFHNFPQSFDEEIILQGQRKVTPGFWEKDVPNLSNDNVMYRLSGEINGHP
GIYEIATRPSVSERTEVIMHRFFNTR
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagtactcgggcaggctgggagcctatgacgagccggtggcgttcgacgacgcc
acggccgacaccctgaagtcggcggcgacggtcttgtcgggcaccctgacggggcaggcg
gcctcgaggtcgtcgtgggcgtcgaccgcgtcgacggatttcgagggccactacgcggac
gtgttcgacacgaacgcgaggatggcctcgacggactgcacgaacatcgcgtcggcgttg
gacgacctggtggccgaggtgcagaagctgaaggaggccgcccaggccgaacgtgagcgg
aggaggcgggccaaggagtgggcggaccggcaggaccgggagaacattgtcaagaggggc
tgggactgggtgtccaacggcgacaagccccccgcaggacccgcccaggtaccgctgccg
cagccccacgaggtcacgaccacaccctggtccgaacccgccccgggccaggcggggggc
gtgtcctcggcccggcccgatgatctgcggacgtactcgtcgaatgtgaccggcgccaat
gacacggtcacgacgcagaagggcaccctggagggggcgctgtctgatttcgcggacagg
tgctcgtggtgcagcatcgacacgtcggggatcacgaccgcgctggcctcgttcggggcg
aacaacacgaacgagacccgctgggtcgacacggtcgcggccgcgttcgaggccgccggc
ggctcgggggccatctcggcggtctcggacgcggccctcgacgcgtccttgcaggccgcc
ggcgtggcccggacccgccggccggtcgacgtgaccgcccccaccatcctgggcgacccg
cagacgtcggggtatgcggacgacccggtcaacacgacgaccgggaacttcgtggagccg
gagaccgacctgtcgttcgacggcgggtgcgcgtccctcgggttcgaccgcgtgtacaac
tccctgtcggccggtatcggggcgttcgggcccggctgggcttccacagccgaccaacgg
ctgcttgtgaccgaggacggcgcggtgtgggtacagccctccggccggcatgtcgtgttc
ccgagactcggcaacggctgggaccgggcccacaacgacacctactggctccacaccacc
accgacaccaccggccccacccccggcgacgcccccaccaccggcgccgctggtggtgcc
ggggtgttcgtggtgtcggacaatgcgggtggccggtgggtgttcgaccgggccggcagg
cccgtctcggtgtctcgtggcccaggcaccagggtggatcaccggtgggacggggaccgg
ctggtcggcctcacccacgagcggggccgggccgtcaccatcgaatggaacgaccaccac
acgcggatcaccgccctggccgcgtcggatggacgccgcgtcgactacggctacgacccg
gccggcagactcctggaagcccgaaccgccggcggggcccgccgctacgggtggaacgaa
cagggtctcatcgccaccgtcacggacccggatggtgtggtcgaggccgccaacacctac
aacgagcacgggcaggtgacatcgcagcggtcccggttcggccgcctctcccactacacc
tacctgcccggcggtgtgacacaggtcgccgacgaggacgggggccgggcgaacacctgg
atccacgaccagaccggccgcctggtggggatggtggacgcggacgggaaccgccagtcc
atcggctgggaccagtggggcaaccgagtccagatcaccggccgcgacggccggaccacc
gtgtgccggtacgacgcgcgaggccggctgatcacacgccaggaggcgtccggcgcccgc
accgactacgaatgggacgaggccgaccgggtcgtgcaggtcaccgtcaccgacaccacc
agcagcagccatggaaacaccagcagcgccggtgggtcggggccgtcggtcacttcgtac
gagtacgagggggccggccggaatccgtcgacggtgacggatccggagggcggggtgacc
cgcctggtctgggaccagaacctgctgaccgaggtggtggatccggccggggtgcgggtg
cggctgggttacgacgggcacggcgacctcgtgtcggccatgaacgcggacggggacacg
gcccgactggcccgtgacggggcgggccgggtcgtcgcggcggtcaccccgctggggcat
cgcaccgagtaccgctacgacgaggccggccggctcgcctcccgccaggacccggacggg
gcgctctggcggtacgaacacacgaccggcggcaggctgtccgcggtggtggacccggac
gggtgttgcaggcggtacggatacggcgggcacggggagcgggagacattcacggatccg
ttgggcgaggttgtgacgtcccggtgggatgatctggggaatcttgccgagacggtgatg
ccggacggggcccggtggcggtatgtgcatgacgggctgtcccggttggtggcgacggtg
gacccggccggcggcgcgtggcgccgcgagtacgacgtcaatggtgcgctggcggcgacg
gtggatccgaccggggtgcgtgtggactgggtcacgagcaaccgggggcgggtccggacg
gtgtcggacggggccgcgtcgggggcggtacggacggacgggctgggccgggtcaccgtg
acgaccggtgatgacggggccgaccgggtgacccggtacgaccggtgcgggcgtccggtc
gagttcatcgacggcgaggggaacacgacccggctggtacgggacccggccgggcgtgtc
aacgctgtggtgcggccgtcgggggctgtcacccggtacggctacgacgtctgcggccgg
ctcgcgcgggtgaccgacccggcgggcggggtggcctgtttcgtctatgacggggattcg
aggcttgtggaggaggcccgccctggtggggagcgggcctggtggtcctacgacgagtgc
gggcgcgtgaccgtgaagcacgcccccgggtacggcacgacccggtacgcctatgaccgg
tcgggccgtgtgacgggtctcgccgatccggtgtgcgggcggcgccggttccggtacgac
cgggccgggaacctcgtcgaggccgtctccgggacgggcggggtgacccggtacggctac
gacacggccggggccctggtgcaggtcacggacccggccggcggggtgacccggtacgaa
cgcgacgagctcggccgggtggtcaagctggtggacccgttgggcagggtcacggtcggc
gagtacgacgcggcgggccggcagacgtcccagaccggcccggacgggcatgtgaccggc
tggtcctacgaccgcacgggccggttcgaggccctgtcctgggacggggccgtgcaccac
cgagtcgtgcgcgacttcgtgaaccgcttgatgcgggtgaccgagaccggcggtgtcacc
cacacggtccggtgggatcatgcgggccggctcgtcgagcgggcccgggacggccgggcc
gtgtcctggggctatgacgccgacgggcgcagggcgtggatgcgcacccccgacggccgg
tctgtccgttacgggtacgacccggcgggcaggctcacccaggtcaccagttcagcgttc
gggcgggtggtctacgagtacggcccgtccgggcggatggtcgccgcgaccgccggcggt
acccgccaggaatgggagcacaccgacggcttcgtcaccggccacatcgtccgccacggc
ggtgtggtgtcgcacacggccgtgggccgcgacgaacagggccgggtcgcatggaccagc
cgggacggggcccacaccgcctacacctacgacggcgcgaaccagctcaccgccaccacc
ggcgacggcggcaccaccgccttcacctgggacccggcaggtcgactcgtcgccgaaacc
acccccgacggcggtcgcgtcgactacacctgggacgcggccggacaactcacccgggtg
gacaccaccggccgggacaccggccgggatgacggcggccgggacgccagccgggatggt
gacggccgggatggtgacggcggggagggcctgtcggtctggttctcctatgacgcggcc
ggccgcagggtccgcgaggagcacgccgacggcaccatccgcacctacgggtgggggccc
ctggcccgcctcgagaccgtcaccatcgactcggccttggaacgggcccgcacatcactg
ttcaccgacgcgctcggtgaactcgccgccctcgacggccggcccctggactgggacacc
gccgtcgggttcccgtccctgctgtcggccgccgacaccagcatgatcagcgtgccgggg
ttcaccgccaccaccggcgccggctggcagacccccggctggcgcaccacccgcaccacc
ggcggcacggacccgtgggccgccggcgccggcaccccactcgacaccaccccggccgcc
ggcggtgggctgctactgggcagggccggtgagttggtgctgcccggaggcctcgagctg
ctgggcgcccgcgtctacgaccccaccacccgggccttcctcagccccgacccgcaggac
cccacgaccggggccggctgggccggcaacccgtacgcgtacgccgccaacaacccggtc
gccttcaccgacccgtccggcctgcacccgctcagcgacgccgacatgaacgcttggcgc
gacgcccacaagaccggggtcgcggccgccggggactggttgaaggacaactgggaatac
atcgcagccggggccgcagtcgtggccggtgtcgccctcatgtgcaccggcgtcggcggg
cccgccggggtcgcgctcatgagcctgtccggggccctcacctcgggcgggatcagcatc
gcgcagcagaaagccaccaacgggtccgtggactgggcccgcgtcggcaccgaggccgcc
atcggcgccatccccgtccccggcggcggaggagccgcggccggacgcgaagcagccgaa
acagccggccgcgaagccctcgaggccaccggacgcgaagtggccgagaccaccggacgc
gaagcagccgaacaagccgcccgcaccaccggcgaacacgaactgtccaccatcggcaca
gacgccgccgaaaacgtgggtgagcacgccagtcagacgaattacatatactcgagtcga
gttcttaatcgttctgctgaagcgggtgattcatttcataatttccctcagagtttcgat
gaagaaatcattttgcaaggtcaaagaaaagtaaccccaggtttctgggaaaaagatgta
cccaacctaagtaatgacaatgtcatgtatcgattaagcggagagattaatggccatcca
ggaatatatgaaattgcaacaaggccatcagtaagcgagagaaccgaagttatcatgcac
cgatttttcaatacgaggtaa
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