Propionibacterium acidifaciens: EGX94_05945
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Entry
EGX94_05945 CDS
T05713
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pacd
Propionibacterium acidifaciens
Pathway
pacd03030
DNA replication
pacd03430
Mismatch repair
pacd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGX94_05945
03430 Mismatch repair
EGX94_05945
03440 Homologous recombination
EGX94_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacd03032
]
EGX94_05945
03400 DNA repair and recombination proteins [BR:
pacd03400
]
EGX94_05945
Enzymes [BR:
pacd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGX94_05945
DNA replication proteins [BR:
pacd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGX94_05945
DNA repair and recombination proteins [BR:
pacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGX94_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AYW77678
LinkDB
All DBs
Position
complement(1410046..1410864)
Genome browser
AA seq
272 aa
AA seq
DB search
MTIDPLLWRAHFMRTGRFRGSRPFLASSGCAPRRAPAAADAIAPVRRNRDDEGRRGLPVR
WKNRSMPGYAVLDLETTGFSPRRGDRIVEIGVVLLDGRGRGQGEWGTLVQPGRSVGATAV
HRITEQDVAGAPTMEQIAGRLVEQLRGRLVVAHNASFDVPFLDAELRRAGVPLPGPMMPR
ACTMRLGRALLRPRPATFKLADCCRATGVGLHHAHSALGDARATAELFRVYMGITDGLDG
PAPWERDLGPAEDYPWPVGLVGPDDAPLLPRP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgatcctctcctgtggcgtgctcattttatgagaacgggccggttcaggggg
agccgtccgttcctcgcatcctccggttgcgcgccgcgaagggccccggcggcggccgat
gccatcgccccggtgcgtcgaaatcgcgatgacgaggggcgacgggggcttccggttcgg
tggaagaatcgttccatgcccggatacgcagtgctcgaccttgagaccaccggtttctca
ccacgccggggggaccggatcgtcgagatcggcgtcgtgctgctcgacggacgcggccgg
ggccagggggagtggggcacgctcgtccagccggggcgcagcgtcggcgccaccgccgtg
caccgcatcaccgagcaggacgtcgccggcgcgccgaccatggagcagatcgccgggcgc
ctcgtcgagcagctgcgcgggcgtctcgtcgtcgcccacaacgcctccttcgacgtgccc
ttcctcgatgccgagctgcgtcgcgccggcgtcccgctcccggggccgatgatgccccgg
gcctgcacgatgcgcctgggacgcgccctgctgcgcccccgcccggccacgttcaagctc
gccgactgctgccgggccaccggcgtcggcctgcaccacgcgcactcggccctgggggac
gccagggccacggccgagctgttccgcgtctacatgggcatcaccgacgggctcgacggc
ccggcgccgtgggagcgggacctcgggccggcggaggactacccctggcccgtcggcctg
gtcggtcccgacgacgccccgctgctcccgcggccctga
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