Propionibacterium acidifaciens: EGX94_10425
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Entry
EGX94_10425 CDS
T05713
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pacd
Propionibacterium acidifaciens
Brite
KEGG Orthology (KO) [BR:
pacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacd03016
]
EGX94_10425 (truB)
Enzymes [BR:
pacd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EGX94_10425 (truB)
Transfer RNA biogenesis [BR:
pacd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGX94_10425 (truB)
Prokaryotic type
EGX94_10425 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AYW78422
LinkDB
All DBs
Position
2463746..2464663
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AA seq
305 aa
AA seq
DB search
MSGRAASTGPSGLIVIDKPAGLTSHQVVGRCRRLYATRRVGHAGTLDPMATGVLIIGVNR
ATRLLGRLALHDKSYTATIRLGSSTVTDDASGEVLTSADASGLADAAVEAAVAALRGPIM
QVPSAVSAIKVNGRRSHARVRAGERVELAARPVTVDEFTVLGRRSHDGLTDLDVVVTCSS
GTYVRALARDLGSALGVGGHLTALRRTRIGGHRIEDVWALPDPDDPEAVAPPLMSMADAA
RISLPVLDIDADQCVAVGHGAALPIDVPAGPTGLIDPQGRLVALYRPDGPGRARPVAVLI
GGDGP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggccgggcggcgtcgaccggccccagcggcctgatcgtcatcgacaagccggcg
ggtctcacttcccaccaggtggtggggcgctgccggcggctctacgcgacccggcgcgtc
gggcacgccggcacgctcgacccgatggccaccggggtgctcatcatcggcgtcaaccgg
gccacccgtctgctcggccgcttggccctgcacgacaagtcctacacggccaccatccgg
ttggggagctcgaccgtcacggatgacgcctccggggaggtcctcacgagcgccgacgcc
tccggcctggccgacgcggccgtcgaggccgccgtcgccgcgctgcgcgggccgatcatg
caggttccgagcgccgtctcggccatcaaggtgaacgggcggcgctcccacgcccgggtg
cgcgccggcgagcgggtcgagctcgccgcccgcccggtcaccgtcgacgagttcaccgtg
ctcggacggcgcagccacgacggcctgaccgatctcgacgtcgtcgtcacctgctcctcg
ggcacctacgtgcgggccctggcccgggacctcggctccgccctgggggtcggcggccac
ctcaccgccctgcgccgcacccgcatcggcggtcaccgcatcgaggacgtctgggccctg
ccggaccccgacgaccccgaggccgtcgcgccgccgctcatgagcatggccgatgcggcc
aggatcagccttccggtgctcgacatcgatgccgaccagtgcgtcgccgtcggccacggc
gccgcgctgcccatcgacgtgcccgccgggcccaccggcctcatcgacccgcaggggcgg
ctcgtcgccctctaccgcccggacgggccgggtcgggcccgcccggtggcggtgctcatc
ggcggggacggcccctga
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