Propionibacterium acidifaciens: EGX94_10955
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Entry
EGX94_10955 CDS
T05713
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pacd
Propionibacterium acidifaciens
Brite
KEGG Orthology (KO) [BR:
pacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pacd03009
]
EGX94_10955 (rimO)
Enzymes [BR:
pacd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EGX94_10955 (rimO)
Ribosome biogenesis [BR:
pacd03009
]
Prokaryotic type
ribosomal protein modification factors
EGX94_10955 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
Motif
Other DBs
NCBI-ProteinID:
AYW78517
LinkDB
All DBs
Position
2588173..2589666
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AA seq
497 aa
AA seq
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MGRTTVHLISLGCARNDVDSEELAGRLEAGGFALVAEPAEADALVVNTCGFIEQAKKDSI
DTILSAADLKSGGRARAVVAVGCLAQRYGRELARALPEADAVLGFDDYTDIAERLRTVLA
GGRPGAPAPRRDRRTLLPLAPVDRHLAPTAVPGHQGELPAGLAPASGPRTPRRRLGHEPW
APLRIASGCDRRCAFCAIPGFRGAHLSREPALVVEEARWLVDQGVREIMLVSENSSSYGK
DLADRRALEGLLAELSRIDGLEWIRVSYVQPAELRPSLLDAMVGTEKVVPYFDISFQHAA
PAVLRRMRRFGDPESFLGLLGRIRERAHRAGIRSNVIVGFPGETEQDVDVLADFLTRARL
DVTGVFSYSDEEGTAAERLDGHLDEDGIAARHRRIADLVDELVDQRAAERIGEPVSVLVE
RVEDGLVEGRAAHQGPEVDGVTELRTAPGGEPPRVGGLVAATVVAANGADLVAEPLTGAG
AGVRNEAERGCGEHERA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaccacagtgcacctcatcagtctcggctgcgcccgcaacgacgtcgactcc
gaggagctcgccgggcgactcgaggccggtggcttcgccctcgtcgccgagcccgccgag
gccgacgcgctcgtggtcaacacgtgcggcttcatcgagcaggccaagaaggactccatc
gacacgatcctgtccgccgcggacctcaagtccggcggccgcgcccgggccgtcgtcgcc
gtcggctgcttggcgcagcgctacggccgcgagctggcgcgggccctgcccgaggccgac
gccgtcctgggcttcgacgactacaccgacatcgccgaacggctccgcacggtcctcgcc
ggcggacgccccggcgctccggcgccccgccgggaccgccgcacgctgctgcccctcgcc
cccgtcgaccgccacctggcgccgacggcggtgcccggccaccagggggagctgccggcg
ggcctggcccccgcgtccggtccgcggacgccccgccgccgcctgggccacgagccgtgg
gccccgctgaggatcgcctccggctgcgaccgccgctgcgccttctgcgccatcccgggc
ttccgcggcgcccatctgtcgcgcgagcccgccctggtcgtcgaggaggcccgctggctc
gtcgaccagggggtgcgcgagatcatgctcgtctcggagaactcgtcgagctacggcaag
gacctggccgaccggcgggcgctcgaggggctgctcgccgagctctcgcggatcgacggg
ctcgagtggatcagggtcagctacgtgcagcccgccgagctgcgcccctcgctcctcgac
gcgatggtcggcaccgagaaggtcgtgccctacttcgacatcagcttccagcacgccgct
cccgccgtgctgcgccgcatgcgccgcttcggcgaccccgagagcttcctcgggctcctc
gggcgcatccgcgagcgggcccaccgggccggcatccgctccaacgtcatcgtcggcttc
cccggcgagaccgagcaggacgtcgacgtcctcgccgacttcctcacgagggcccgcctc
gacgtcaccggggtcttcagctactcggacgaggagggcaccgcggccgagcggctcgac
gggcacctcgacgaggacgggatcgcggcccgccaccggcgtatcgccgatctcgtcgac
gagctcgtcgaccagcgcgccgccgagcggatcggcgagccggtgagcgtgctcgtcgaa
cgcgtcgaggacggcctcgtcgagggccgcgccgcccaccaggggcccgaggtcgacggc
gtcaccgagctgcgcaccgcccccggcggtgagccgccccgcgtgggcggtctcgtggcg
gctacggtggtggcagcgaacggcgccgatctggtcgccgagcccctgaccggtgccggt
gcgggcgtgcggaacgaagcggaacgggggtgcggcgagcatgagcgagcctga
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